RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 C7orf31Q8N865 590 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 RETREG2Q8NC44 543 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 HERVK_113Q902F9 699 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 INPP4AQ96PE3 977 aaPredicted RBP19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 CTAGE1Q96RT6 745 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 FAM217BQ9NTX9 383 aaPredicted RBP19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 RBAK-RBAKDNI3L0D1 243 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 PPFIA4O75335 1185 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 STAM2O75886 525 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 DNAJB2P25686 324 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 ICAM3P32942 547 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 PBX2P40425 430 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 ZNF200P98182 395 aaPredicted RBP19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 FUT2Q10981 343 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 CYFIP1Q7L576 1253 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 TMX3Q96JJ7 454 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 CDX2Q99626 313 aaPredicted RBP19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 KATNAL1Q9BW62 490 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 TELO2Q9Y4R8 837 aa19.5■□□□□ 0.71
PRPF40A-204ENST00000450303 ZBBXA8MT70 800 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 HAS3O00219 553 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 CPLX1O14810 134 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 FIBPO43427 364 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 F2P00734 622 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 IQCF3P0C7M6 154 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 HOXD8P13378 290 aaPredicted RBP19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 ADD1P35611 737 aaKnown RBP19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 NAPAP54920 295 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 CCT2P78371 535 aaKnown RBP19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 SP4Q02446 784 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 BFSP2Q13515 415 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 TYW1BQ6NUM6 668 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 SESTD1Q86VW0 696 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 C16orf70Q9BSU1 422 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 GTF2IRD1Q9UHL9 959 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 PCDHA6Q9UN73 950 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 PCDHA8Q9Y5H6 950 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 GBF1Q92538 1859 aa19.49■□□□□ 0.71
PRPF40A-204ENST00000450303 NID2Q14112 1375 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 SPDYE3A6NKU9 549 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 NOP56O00567 594 aaKnown RBP19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 HSP90AA1P07900 732 aaKnown RBP19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 NEDD9Q14511 834 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 HIC1Q14526 733 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 NLRX1Q86UT6 975 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 MYLIPQ8WY64 445 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 DHX38Q92620 1227 aaKnown RBP19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 GTF3C6Q969F1 213 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 PGBD1Q96JS3 809 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 PBX4Q9BYU1 374 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 TANC1Q9C0D5 1861 aa19.48■□□□□ 0.71
PRPF40A-204ENST00000450303 PITPNM1O00562 1244 aa19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 CDKL5O76039 1030 aa19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 LGALS2P05162 132 aa19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 XRRA1Q6P2D8 792 aa19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 SLC17A8Q8NDX2 589 aa19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 TET1Q8NFU7 2136 aa19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 TIFAQ96CG3 184 aa19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 FTOQ9C0B1 505 aaKnown RBP eCLIP19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 MTIF3Q9H2K0 278 aaKnown RBP19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 PKD2L1Q9P0L9 805 aa19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.47■□□□□ 0.71
PRPF40A-204ENST00000450303 STXBP3O00186 592 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 ATP9AO75110 1047 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 LARGE1O95461 756 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 ITGB5P18084 799 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 SCRN1Q12765 414 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 UTP14CQ5TAP6 766 aaKnown RBP19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 METTL7BQ6UX53 244 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 CCDC83Q8IWF9 413 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 CCDC155Q8N6L0 562 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 NECAB1Q8N987 351 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 GPR20Q99678 358 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 TMEM260Q9NX78 707 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 SLC4A7Q9Y6M7 1214 aa19.46■□□□□ 0.71
PRPF40A-204ENST00000450303 SMCO2A6NFE2 343 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 H3BRB1 525 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 PPFIA3O75145 1194 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 ADCY7P51828 1080 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 RABGGTBP53611 331 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 GRIN2CQ14957 1233 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 TRIM50Q86XT4 487 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 CAGE1Q8TC20 777 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 WNT8BQ93098 351 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 LLPHQ9BRT6 129 aaKnown RBP19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 ZNF576Q9H609 170 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 TUT1Q9H6E5 874 aaKnown RBP19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 RIC8AQ9NPQ8 531 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 UBIAD1Q9Y5Z9 338 aa19.45■□□□□ 0.7
PRPF40A-204ENST00000450303 PFKMP08237 780 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 CKBP12277 381 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 RFC2P35250 354 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 AKAP17AQ02040 695 aaKnown RBP19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 PTK7Q13308 1070 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 CUL4AQ13619 759 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 GPRASP2Q96D09 838 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 SENP7Q9BQF6 1050 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 NKX2-4Q9H2Z4 354 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 NCOA5Q9HCD5 579 aaKnown RBP19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 BARHL2Q9NY43 387 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms