RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 A0A1W2PQY0 241 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
LINC00408-201ENST00000447784 FAM86B1E9PN63 330 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 BAG4O95429 457 aaKnown RBP13.12□□□□□ -0.31
LINC00408-201ENST00000447784 TDP2O95551 362 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 F13A1P00488 732 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 FAM86B2P0C5J1 330 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
LINC00408-201ENST00000447784 CYP3A7P24462 503 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 ICAM3P32942 547 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 MCM7P33993 719 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 BMP8BP34820 402 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 RESTQ13127 1097 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
LINC00408-201ENST00000447784 NEDD9Q14511 834 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 ZNF174Q15697 407 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 KCNA10Q16322 511 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 FERMT2Q96AC1 680 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 SDF4Q9BRK5 362 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 AP5M1Q9H0R1 490 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 MLXIPQ9HAP2 919 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 KCNH7Q9NS40 1196 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 ZMYND8Q9ULU4 1186 aaPredicted RBP13.12□□□□□ -0.31
LINC00408-201ENST00000447784 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
LINC00408-201ENST00000447784 CEP131Q9UPN4 1083 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 ELP1O95163 1332 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 ZNFX1Q9P2E3 1918 aaKnown RBP13.11□□□□□ -0.31
LINC00408-201ENST00000447784 MYADML2A6NDP7 307 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC00408-201ENST00000447784 CTAGE5O15320 804 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 NEMFO60524 1076 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 BRD1O95696 1058 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 SMPD1P17405 629 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 PKP1Q13835 747 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 Q4G0T1 1027 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 DUSP28Q4G0W2 176 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 BRDTQ58F21 947 aaPredicted RBP13.11□□□□□ -0.31
LINC00408-201ENST00000447784 GNASQ5JWF2 1037 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 MYSM1Q5VVJ2 828 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 TLK2Q86UE8 772 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
LINC00408-201ENST00000447784 GLT1D1Q96MS3 346 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 STARD7Q9NQZ5 370 aa13.11□□□□□ -0.31
LINC00408-201ENST00000447784 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
LINC00408-201ENST00000447784 PLXNA1Q9UIW2 1896 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 IGLV3-22A0A075B6J6 115 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
LINC00408-201ENST00000447784 DYNC1LI2O43237 492 aaPredicted RBP13.1□□□□□ -0.31
LINC00408-201ENST00000447784 RGS20O76081 388 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 BMP15O95972 392 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 GH1P01241 217 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 ASGR1P07306 291 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 ARP10275 920 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 SYN1P17600 705 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 LAMC2Q13753 1193 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 CALCRLQ16602 461 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 SLFN12Q8IYM2 578 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 TOX2Q96NM4 488 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 AGO4Q9HCK5 861 aaKnown RBP13.1□□□□□ -0.31
LINC00408-201ENST00000447784 TBC1D22BQ9NU19 505 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
LINC00408-201ENST00000447784 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 NOP56O00567 594 aaKnown RBP13.09□□□□□ -0.31
LINC00408-201ENST00000447784 TBX3O15119 743 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 MSH4O15457 936 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 ZEB2O60315 1214 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 GAS7O60861 476 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 CABYRO75952 493 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 GGPS1O95749 300 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 NCLP19338 710 aaKnown RBP13.09□□□□□ -0.31
LINC00408-201ENST00000447784 MAGEA10P43363 369 aaPredicted RBP13.09□□□□□ -0.31
LINC00408-201ENST00000447784 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
LINC00408-201ENST00000447784 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
LINC00408-201ENST00000447784 FSCN1Q16658 493 aaKnown RBP13.09□□□□□ -0.31
LINC00408-201ENST00000447784 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
LINC00408-201ENST00000447784 ATL3Q6DD88 541 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
LINC00408-201ENST00000447784 ANKRD33Q7Z3H0 272 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 OR6J1Q8NGC5 347 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 FAM20AQ96MK3 541 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 MBOAT7Q96N66 472 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 RIT2Q99578 217 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 PRKAG2Q9UGJ0 569 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 CFAP45Q9UL16 551 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 PCDHB6Q9Y5E3 794 aa13.09□□□□□ -0.31
LINC00408-201ENST00000447784 LAD1O00515 517 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 SLC37A4O43826 429 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 SORBS3O60504 671 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 ARIH2O95376 493 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 OR52Z1P0C646 297 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
LINC00408-201ENST00000447784 DDIT3P35638 169 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms