RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 WDR5P61964 334 aaKnown RBP13.59□□□□□ -0.23
HDAC4-202ENST00000430200 ZNF618Q5T7W0 954 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 PCNX4Q63HM2 1172 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 PPP2R2DQ66LE6 453 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 KRT40Q6A162 431 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 CYFIP1Q7L576 1253 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
HDAC4-202ENST00000430200 SAMD3Q8N6K7 520 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 C7orf31Q8N865 590 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 CAGE1Q8TC20 777 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 GPR20Q99678 358 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 CERS4Q9HA82 394 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 FAM217BQ9NTX9 383 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-202ENST00000430200 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 MYH9P35579 1960 aaKnown RBP13.59□□□□□ -0.23
HDAC4-202ENST00000430200 EVPLQ92817 2033 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 CDC45O75419 566 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 SMIM10L2AP0DMW4 78 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 SMIM10L2BP0DMW5 78 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 KCNA2P16389 499 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 SMARCA1P28370 1054 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 CDC27P30260 824 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 KIF5BP33176 963 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 SP4Q02446 784 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 BFSP2Q13515 415 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 METTL7BQ6UX53 244 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 SERINC5Q86VE9 423 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 FANCBQ8NB91 859 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 MTIF3Q9H2K0 278 aaKnown RBP13.58□□□□□ -0.24
HDAC4-202ENST00000430200 MSRAQ9UJ68 235 aa13.58□□□□□ -0.24
HDAC4-202ENST00000430200 NCOR1O75376 2440 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 TREHO43280 583 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 FIBPO43427 364 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 TAP1Q03518 808 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 PTK7Q13308 1070 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 KCNV1Q6PIU1 500 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 HEATR3Q7Z4Q2 680 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 HERC6Q8IVU3 1022 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 SMARCC2Q8TAQ2 1214 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 ZBTB10Q96DT7 871 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 NEK1Q96PY6 1258 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 SLC9A7Q96T83 725 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 FTOQ9C0B1 505 aaKnown RBP eCLIP13.57□□□□□ -0.24
HDAC4-202ENST00000430200 SLC28A3Q9HAS3 691 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 PKD2L1Q9P0L9 805 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 SEC63Q9UGP8 760 aaKnown RBP13.57□□□□□ -0.24
HDAC4-202ENST00000430200 SLC12A7Q9Y666 1083 aa13.57□□□□□ -0.24
HDAC4-202ENST00000430200 H3BRB1 525 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 TGFB3P10600 412 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 ADAM17P78536 824 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 CCDC85BQ15834 202 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-202ENST00000430200 RETREG2Q8NC44 543 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 CYP2W1Q8TAV3 490 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 LMBR1Q8WVP7 490 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 LZTS2Q9BRK4 669 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 TUT1Q9H6E5 874 aaKnown RBP13.56□□□□□ -0.24
HDAC4-202ENST00000430200 MLXIPQ9HAP2 919 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 UBIAD1Q9Y5Z9 338 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 NID2Q14112 1375 aa13.56□□□□□ -0.24
HDAC4-202ENST00000430200 KLF18A0A0U1RQI7 1052 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 STXBP3O00186 592 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 BAIAP3O94812 1187 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 CTSHP09668 335 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 CALM1P0DP23 149 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 CALM2P0DP24 149 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 CALM3P0DP25 149 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 TRAF1Q13077 416 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 TSGA10IPQ3SY00 556 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 GNPTABQ3T906 1256 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
HDAC4-202ENST00000430200 CNKSR3Q6P9H4 555 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC4-202ENST00000430200 RUFY4Q6ZNE9 571 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 CCDC155Q8N6L0 562 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 KCNB2Q92953 911 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 GAS2L1Q99501 681 aaPredicted RBP13.55□□□□□ -0.24
HDAC4-202ENST00000430200 RNPEPQ9H4A4 650 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 PSTPIP2Q9H939 334 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 SETD4Q9NVD3 440 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 TMEM260Q9NX78 707 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 SNX14Q9Y5W7 946 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 PLXNA4Q9HCM2 1894 aa13.55□□□□□ -0.24
HDAC4-202ENST00000430200 GSTTP1A0A1W2PQM5 241 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 C17orf102A2RUQ5 167 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 GOLGA8AA7E2F4 631 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 GOLGA8BA8MQT2 603 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 LPXNO60711 386 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 STAM2O75886 525 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 ACTN1P12814 892 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 IGFBP4P22692 258 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 THPOP40225 353 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 GNAQP50148 359 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 RTN1Q16799 776 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 DHX32Q7L7V1 743 aaKnown RBP13.54□□□□□ -0.24
HDAC4-202ENST00000430200 TMTC2Q8N394 836 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms