RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 TCP11Q8WWU5 503 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 TTC25Q96NG3 672 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 PNMA3Q9UL41 463 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 CLGNO14967 610 aa13.83□□□□□ -0.19
LDB3-205ENST00000429277 BAG2O95816 211 aa13.83□□□□□ -0.19
LDB3-205ENST00000429277 ACTN1P12814 892 aa13.83□□□□□ -0.19
LDB3-205ENST00000429277 IREB2P48200 963 aaKnown RBP13.83□□□□□ -0.19
LDB3-205ENST00000429277 ARL13BQ3SXY8 428 aa13.83□□□□□ -0.19
LDB3-205ENST00000429277 SLC35F6Q8N357 371 aa13.83□□□□□ -0.19
LDB3-205ENST00000429277 WHAMMQ8TF30 809 aa13.83□□□□□ -0.19
LDB3-205ENST00000429277 COA1Q9GZY4 146 aa13.83□□□□□ -0.19
LDB3-205ENST00000429277 ORC6Q9Y5N6 252 aa13.83□□□□□ -0.19
LDB3-205ENST00000429277 PNMA6FA0A0J9YX94 578 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 ATP1A2P50993 1020 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 RHOT2Q8IXI1 618 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 RTKN2Q8IZC4 609 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 DHX38Q92620 1227 aaKnown RBP13.83□□□□□ -0.2
LDB3-205ENST00000429277 ATP6V1E2Q96A05 226 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 NLRP1Q9C000 1473 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 OPHN1O60890 802 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
LDB3-205ENST00000429277 ZBTB1Q9Y2K1 713 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 WDR64B1ANS9 1081 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 POC1B-GALNT4F8VUJ3 575 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 NDUFAF2Q8N183 169 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 FAM167AQ96KS9 214 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 NUDCD1Q96RS6 583 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 KIAA1586Q9HCI6 787 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 GCNT4Q9P109 453 aa13.83□□□□□ -0.2
LDB3-205ENST00000429277 PRPSAP2O60256 369 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 ANXA13P27216 316 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 SERPINB6P35237 376 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 JAK3P52333 1124 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 CAPN12Q6ZSI9 719 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
LDB3-205ENST00000429277 PANX2Q96RD6 677 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 PIGSQ96S52 555 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 MAP2K2P36507 400 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 RC3H1Q5TC82 1133 aaKnown RBP13.82□□□□□ -0.2
LDB3-205ENST00000429277 CLEC4GQ6UXB4 293 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 DNAAF3Q8N9W5 541 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 MTA3Q9BTC8 594 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 PUS3Q9BZE2 481 aaKnown RBP13.82□□□□□ -0.2
LDB3-205ENST00000429277 SYNMO15061 1565 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 SAT1P21673 171 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 PDZD8Q8NEN9 1154 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 NPR1P16066 1061 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 LTKP29376 864 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 CIITAP33076 1130 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 ADAT2Q7Z6V5 191 aaKnown RBP13.82□□□□□ -0.2
LDB3-205ENST00000429277 MICAL1Q8TDZ2 1067 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 DCAF4Q8WV16 495 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 APOL6Q9BWW8 343 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 BRIP1Q9BX63 1249 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 FBXO40Q9UH90 709 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 HEG1Q9ULI3 1381 aa13.82□□□□□ -0.2
LDB3-205ENST00000429277 M0R2C6 588 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 RCAN1P53805 252 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 GRAPQ13588 217 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 KRT39Q6A163 491 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 KIAA1841Q6NSI8 718 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 NLRP10Q86W26 655 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 CCNYQ8ND76 341 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 GRAPLQ8TC17 118 aaPredicted RBP13.81□□□□□ -0.2
LDB3-205ENST00000429277 GPT2Q8TD30 523 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 MAN1B1Q9UKM7 699 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 MT-ND3P03897 115 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 PLA2G4BP0C869 781 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 TFAMQ00059 246 aaKnown RBP13.81□□□□□ -0.2
LDB3-205ENST00000429277 RBL2Q08999 1139 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 SNCBQ16143 134 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 TMEM179Q6ZVK1 233 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 DDX17Q92841 729 aaKnown RBP13.81□□□□□ -0.2
LDB3-205ENST00000429277 PLEKHA4Q9H4M7 779 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 PPP1R9AQ9ULJ8 1098 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 MYO3BQ8WXR4 1341 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 SYNJ2BP-COX16A0A087WUM0 186 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 ALS2CLQ60I27 953 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 KCTD1Q719H9 257 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 RPF1Q9H9Y2 349 aaKnown RBP13.81□□□□□ -0.2
LDB3-205ENST00000429277 COX16Q9P0S2 106 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 PRKAG2Q9UGJ0 569 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 CCDC188H7C350 402 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 DARS2Q6PI48 645 aaKnown RBP13.81□□□□□ -0.2
LDB3-205ENST00000429277 PI4K2BQ8TCG2 481 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 RNF139Q8WU17 664 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
LDB3-205ENST00000429277 CCDC151A5D8V7 595 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 SEMA3FQ13275 785 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 NAA35Q5VZE5 725 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 GCNAQ96QF7 691 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
LDB3-205ENST00000429277 NCAPD2Q15021 1401 aa13.81□□□□□ -0.2
LDB3-205ENST00000429277 ARHGAP31Q2M1Z3 1444 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 ZNF189O75820 626 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms