RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CNNM2Q9H8M5 875 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 RALGAPA2Q2PPJ7 1873 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 KLRF2D3W0D1 207 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 H3BNC9 293 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 GCOM1H8Y6P7 765 aaPredicted RBP11.63□□□□□ -0.55
MDC1-202ENST00000416571 HIP1O00291 1037 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 CAND2O75155 1236 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 RGS20O76081 388 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 CTSHP09668 335 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 POLR2MP0CAP2 368 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 SMIM10L2AP0DMW4 78 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 SMIM10L2BP0DMW5 78 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 GNAT1P11488 350 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 RRP1P56182 461 aaKnown RBP11.63□□□□□ -0.55
MDC1-202ENST00000416571 GHRHRQ02643 423 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 HDAC1Q13547 482 aaPredicted RBP11.63□□□□□ -0.55
MDC1-202ENST00000416571 HIC1Q14526 733 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 GNPTABQ3T906 1256 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 STOX1Q6ZVD7 989 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 VSIG10LQ86VR7 867 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 TMEM192Q8IY95 271 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 STAG2Q8N3U4 1231 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 NEK9Q8TD19 979 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 PABPC5Q96DU9 382 aaKnown RBP11.63□□□□□ -0.55
MDC1-202ENST00000416571 IFIH1Q9BYX4 1025 aaKnown RBP11.63□□□□□ -0.55
MDC1-202ENST00000416571 NSUN3Q9H649 340 aaKnown RBP11.63□□□□□ -0.55
MDC1-202ENST00000416571 ZSWIM5Q9P217 1185 aa11.63□□□□□ -0.55
MDC1-202ENST00000416571 OPLAHO14841 1288 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 TREHO43280 583 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 DCXO43602 365 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 LGALS2P05162 132 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 SP2Q02086 613 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 TCEAL5Q5H9L2 206 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 B4GALNT3Q6L9W6 998 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 FCHSD1Q86WN1 690 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 APBB2Q92870 758 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 TOP1MTQ969P6 601 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
MDC1-202ENST00000416571 DSCC1Q9BVC3 393 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 USP26Q9BXU7 913 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 RNPEPQ9H4A4 650 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 CLDND1Q9NY35 253 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 PRKAG3Q9UGI9 489 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
MDC1-202ENST00000416571 COL4A6Q14031 1691 aa11.62□□□□□ -0.55
MDC1-202ENST00000416571 PPP1R11O60927 126 aaPredicted RBP11.61□□□□□ -0.55
MDC1-202ENST00000416571 CTNNB1P35222 781 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 TRDNQ13061 729 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 MKRN4PQ13434 485 aaPredicted RBP11.61□□□□□ -0.55
MDC1-202ENST00000416571 NEDD9Q14511 834 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 FIBCD1Q8N539 461 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 GPKOWQ92917 476 aaPredicted RBP eCLIP11.61□□□□□ -0.55
MDC1-202ENST00000416571 UPF3BQ9BZI7 483 aaKnown RBP11.61□□□□□ -0.55
MDC1-202ENST00000416571 SETD4Q9NVD3 440 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 MAD2L2Q9UI95 211 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 RWDD3Q9Y3V2 267 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 DOCK5Q9H7D0 1870 aa11.61□□□□□ -0.55
MDC1-202ENST00000416571 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.6□□□□□ -0.55
MDC1-202ENST00000416571 ERICH2A1L162 156 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 RBAK-RBAKDNI3L0D1 243 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 NCK2O43639 380 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 STAM2O75886 525 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 HOXC8P31273 242 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 CYFIP1Q7L576 1253 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 MTMR8Q96EF0 704 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 IL17RAQ96F46 866 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 PIGSQ96S52 555 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 C11orf84Q9BUA3 381 aaPredicted RBP11.6□□□□□ -0.55
MDC1-202ENST00000416571 RWDD1Q9H446 243 aaPredicted RBP11.6□□□□□ -0.55
MDC1-202ENST00000416571 KAT6AQ92794 2004 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 ZDBF2Q9HCK1 2354 aa11.6□□□□□ -0.55
MDC1-202ENST00000416571 PKD1L2Q7Z442 2459 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 PALM3A6NDB9 673 aaPredicted RBP11.59□□□□□ -0.55
MDC1-202ENST00000416571 FIBPO43427 364 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 ARHGAP4P98171 946 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 SP4Q02446 784 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 ZP2Q05996 745 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 UTP14CQ5TAP6 766 aaKnown RBP11.59□□□□□ -0.55
MDC1-202ENST00000416571 METTL7BQ6UX53 244 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 POP1Q99575 1024 aaKnown RBP11.59□□□□□ -0.55
MDC1-202ENST00000416571 LMAN2LQ9H0V9 348 aa11.59□□□□□ -0.55
MDC1-202ENST00000416571 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 CSPG5O95196 566 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 RB1P06400 928 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 ICAM3P32942 547 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 FOXK2Q01167 660 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 GRM4Q14833 912 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 SEC23AQ15436 765 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 RSPH3Q86UC2 560 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 CHD1LQ86WJ1 897 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 TRIM50Q86XT4 487 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 SMARCC2Q8TAQ2 1214 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 CUL5Q93034 780 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 INPP4AQ96PE3 977 aaPredicted RBP11.58□□□□□ -0.56
MDC1-202ENST00000416571 GPR20Q99678 358 aa11.58□□□□□ -0.56
MDC1-202ENST00000416571 KCNH6Q9H252 994 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms