RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TRIM47Q96LD4 638 aa16.97■□□□□ 0.31
SCAF11-204ENST00000395454 MBOAT7Q96N66 472 aa16.97■□□□□ 0.31
SCAF11-204ENST00000395454 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
SCAF11-204ENST00000395454 KBTBD4Q9NVX7 518 aa16.97■□□□□ 0.31
SCAF11-204ENST00000395454 COL20A1Q9P218 1284 aa16.97■□□□□ 0.31
SCAF11-204ENST00000395454 POTEB2H3BUK9 544 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 FKTNO75072 461 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 ZNF18P17022 549 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 UBA7P41226 1012 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 GHRHRQ02643 423 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 GRB14Q14449 540 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 KARSQ15046 597 aaKnown RBP16.96■□□□□ 0.31
SCAF11-204ENST00000395454 ABRAQ8N0Z2 381 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 SAMD3Q8N6K7 520 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 CD99L2Q8TCZ2 262 aa16.96■□□□□ 0.31
SCAF11-204ENST00000395454 CYP3A7-CYP3A51PA0A087WV96 503 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 SLC37A4O43826 429 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 CYP3A7P24462 503 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 STAT6P42226 847 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 AFMP43652 599 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 CNTN2Q02246 1040 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 CUL4BQ13620 913 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 PDIA5Q14554 519 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 DPP9Q86TI2 863 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 SPC24Q8NBT2 197 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 MED15Q96RN5 788 aa16.96■□□□□ 0.3
SCAF11-204ENST00000395454 TTC12Q9H892 705 aaPredicted RBP16.96■□□□□ 0.3
SCAF11-204ENST00000395454 PP2D1A8MPX8 630 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 TDP2O95551 362 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 USP11P51784 963 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 CAP1Q01518 475 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 CALCRLQ16602 461 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 TAAR1Q96RJ0 339 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 RMDN3Q96TC7 470 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 MMTAG2Q9BU76 263 aaKnown RBP16.95■□□□□ 0.3
SCAF11-204ENST00000395454 MAF1Q9H063 256 aa16.95■□□□□ 0.3
SCAF11-204ENST00000395454 SLC15A5A6NIM6 579 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 FOSP01100 380 aaPredicted RBP16.94■□□□□ 0.3
SCAF11-204ENST00000395454 CDC25AP30304 524 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 RRAGBQ5VZM2 374 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 SOCS4Q8WXH5 440 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 ANO3Q9BYT9 981 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 IMPACTQ9P2X3 320 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 LCTP09848 1927 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 DNAJC25-GNG10A0A024R161 153 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 COBLO75128 1261 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 HSPA1AP0DMV8 641 aaKnown RBP16.94■□□□□ 0.3
SCAF11-204ENST00000395454 HSPA1BP0DMV9 641 aaKnown RBP16.94■□□□□ 0.3
SCAF11-204ENST00000395454 EIF2AK2P19525 551 aaKnown RBP16.94■□□□□ 0.3
SCAF11-204ENST00000395454 PTGS1P23219 599 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 UBXN2AP68543 259 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 FANCCQ00597 558 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 KCNB1Q14721 858 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 MORN1Q5T089 497 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 ARHGEF16Q5VV41 709 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 CABP7Q86V35 215 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 LRRC15Q8TF66 581 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 XPO4Q9C0E2 1151 aaKnown RBP16.94■□□□□ 0.3
SCAF11-204ENST00000395454 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
SCAF11-204ENST00000395454 PLXNA1Q9UIW2 1896 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 PPP1R3GB7ZBB8 358 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 SLC26A4O43511 780 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 CYP2B6P20813 491 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 MAP2K5Q13163 448 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 CCDC186Q7Z3E2 898 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 NSUN6Q8TEA1 469 aaKnown RBP16.93■□□□□ 0.3
SCAF11-204ENST00000395454 PXMP2Q9NR77 195 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 ADD3Q9UEY8 706 aaKnown RBP16.93■□□□□ 0.3
SCAF11-204ENST00000395454 NRBP1Q9UHY1 535 aa16.93■□□□□ 0.3
SCAF11-204ENST00000395454 CASP8AP2Q9UKL3 1982 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 ATP1A3P13637 1013 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
SCAF11-204ENST00000395454 CASP1P29466 404 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 PRKCZQ05513 592 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 DNERQ8NFT8 737 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 KIAA1524Q8TCG1 905 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 HAS1Q92839 578 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 ZNF830Q96NB3 372 aaPredicted RBP16.92■□□□□ 0.3
SCAF11-204ENST00000395454 RAB34Q9BZG1 259 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 EHMT1Q9H9B1 1298 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 SPTLC3Q9NUV7 552 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 FANCLQ9NW38 375 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 SLC5A4Q9NY91 659 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 IFNKQ9P0W0 207 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 GJD2Q9UKL4 321 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 ASTN1O14525 1302 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 ZNF236Q9UL36 1845 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 SOWAHBA6NEL2 793 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 PLCG1P19174 1290 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 SREBF1P36956 1147 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 RGS2P41220 211 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 TECP42680 631 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 ALDH5A1P51649 535 aaPredicted RBP16.92■□□□□ 0.3
SCAF11-204ENST00000395454 DHX8Q14562 1220 aaKnown RBP16.92■□□□□ 0.3
SCAF11-204ENST00000395454 ARHGEF6Q15052 776 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 TMEM266Q2M3C6 531 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms