RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 WDR5P61964 334 aaKnown RBP19.11■□□□□ 0.65
PTPRK-208ENST00000392449 PTK7Q13308 1070 aa19.11■□□□□ 0.65
PTPRK-208ENST00000392449 GNPTABQ3T906 1256 aa19.11■□□□□ 0.65
PTPRK-208ENST00000392449 BMP2KLQ5H9B9 411 aa19.11■□□□□ 0.65
PTPRK-208ENST00000392449 MICALL1Q8N3F8 863 aa19.11■□□□□ 0.65
PTPRK-208ENST00000392449 MTA3Q9BTC8 594 aa19.11■□□□□ 0.65
PTPRK-208ENST00000392449 SLC12A7Q9Y666 1083 aa19.11■□□□□ 0.65
PTPRK-208ENST00000392449 LCHNA4D1U4 455 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 H3BRB1 525 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 SMARCA1P28370 1054 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 ICAM3P32942 547 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 TMTC3Q6ZXV5 915 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 CENPQQ7L2Z9 268 aaPredicted RBP19.1■□□□□ 0.65
PTPRK-208ENST00000392449 CUL5Q93034 780 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 GPR20Q99678 358 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 LZTS2Q9BRK4 669 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 TUT1Q9H6E5 874 aaKnown RBP19.1■□□□□ 0.65
PTPRK-208ENST00000392449 MUC3AQ02505 3323 aa19.1■□□□□ 0.65
PTPRK-208ENST00000392449 PIK3CDO00329 1044 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 NOP56O00567 594 aaKnown RBP19.09■□□□□ 0.65
PTPRK-208ENST00000392449 FIBPO43427 364 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 BAIAP3O94812 1187 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 CXCL10P02778 98 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 SMIM10L2AP0DMW4 78 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 SMIM10L2BP0DMW5 78 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 GNAQP50148 359 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 ADCK5Q3MIX3 580 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 PCNX4Q63HM2 1172 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 KRT40Q6A162 431 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 METTL7BQ6UX53 244 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 RASEFQ8IZ41 740 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 TMTC2Q8N394 836 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 TREHO43280 583 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 CALM1P0DP23 149 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 CALM2P0DP24 149 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 CALM3P0DP25 149 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 THPOP40225 353 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 KCNJ6P48051 423 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 TAP1Q03518 808 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 UTP14CQ5TAP6 766 aaKnown RBP19.09■□□□□ 0.65
PTPRK-208ENST00000392449 CNKSR3Q6P9H4 555 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 HEATR3Q7Z4Q2 680 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 SERINC5Q86VE9 423 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 FANCBQ8NB91 859 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 PHOSPHO2Q8TCD6 241 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 OSBPL7Q9BZF2 842 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 PSTPIP2Q9H939 334 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 PKD2L1Q9P0L9 805 aa19.09■□□□□ 0.65
PTPRK-208ENST00000392449 COL4A4P53420 1690 aaPredicted RBP19.08■□□□□ 0.65
PTPRK-208ENST00000392449 C17orf102A2RUQ5 167 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 TLL1O43897 1013 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 ATP9AO75110 1047 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 STAM2O75886 525 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 NEDD9Q14511 834 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 ARNTL2Q8WYA1 636 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 ATP6V0A1Q93050 837 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 RNPEPQ9H4A4 650 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 BRPF3Q9ULD4 1205 aa19.08■□□□□ 0.64
PTPRK-208ENST00000392449 PRRC2BQ5JSZ5 2229 aaKnown RBP19.08■□□□□ 0.64
PTPRK-208ENST00000392449 ITGB5P18084 799 aa19.07■□□□□ 0.64
PTPRK-208ENST00000392449 HOXC8P31273 242 aa19.07■□□□□ 0.64
PTPRK-208ENST00000392449 FAM117BQ6P1L5 589 aa19.07■□□□□ 0.64
PTPRK-208ENST00000392449 APOA5Q6Q788 366 aa19.07■□□□□ 0.64
PTPRK-208ENST00000392449 SGMS1Q86VZ5 419 aa19.07■□□□□ 0.64
PTPRK-208ENST00000392449 NEK1Q96PY6 1258 aa19.07■□□□□ 0.64
PTPRK-208ENST00000392449 SETD4Q9NVD3 440 aa19.07■□□□□ 0.64
PTPRK-208ENST00000392449 TTC28Q96AY4 2481 aa19.07■□□□□ 0.64
PTPRK-208ENST00000392449 CNTNAP5Q8WYK1 1306 aa19.06■□□□□ 0.64
PTPRK-208ENST00000392449 CTSHP09668 335 aa19.06■□□□□ 0.64
PTPRK-208ENST00000392449 TYW1BQ6NUM6 668 aa19.06■□□□□ 0.64
PTPRK-208ENST00000392449 USP26Q9BXU7 913 aa19.06■□□□□ 0.64
PTPRK-208ENST00000392449 RSPH10B2B2RC85 870 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 KIF28PB7ZC32 967 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 RSPH10BP0C881 870 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 CPA1P15085 419 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 KCNA2P16389 499 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 EXOSC10Q01780 885 aaKnown RBP19.05■□□□□ 0.64
PTPRK-208ENST00000392449 TJAP1Q5JTD0 557 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 RNF20Q5VTR2 975 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 WWC2Q6AWC2 1192 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.05■□□□□ 0.644e-7■■□□□ 11.8
PTPRK-208ENST00000392449 PGBD1Q96JS3 809 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 ZBED2Q9BTP6 218 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 THEGQ9P2T0 379 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 MICAL3Q7RTP6 2002 aa19.05■□□□□ 0.64
PTPRK-208ENST00000392449 CDC45O75419 566 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 LGR5O75473 907 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 PARNO95453 639 aaKnown RBP19.04■□□□□ 0.64
PTPRK-208ENST00000392449 XRRA1Q6P2D8 792 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 NLRX1Q86UT6 975 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 DBF4BQ8NFT6 615 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 MTUS1Q9ULD2 1270 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 PCDHA6Q9UN73 950 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 PCDHA8Q9Y5H6 950 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 MTCH2Q9Y6C9 303 aa19.04■□□□□ 0.64
PTPRK-208ENST00000392449 ABHD14A-ACY1A0A1B0GW23 586 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 TCF7P36402 384 aaPredicted RBP19.03■□□□□ 0.64
PTPRK-208ENST00000392449 FUT2Q10981 343 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 IKBKEQ14164 716 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 LMBR1Q8WVP7 490 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms