RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 WDR12Q9GZL7 423 aaKnown RBP6.59□□□□□ -1.35
ERCC4-202ENST00000389138 EFCC1Q9HA90 598 aa6.59□□□□□ -1.35
ERCC4-202ENST00000389138 VTA1Q9NP79 307 aa6.59□□□□□ -1.35
ERCC4-202ENST00000389138 VPS45Q9NRW7 570 aa6.59□□□□□ -1.35
ERCC4-202ENST00000389138 ZNRF3Q9ULT6 936 aa6.59□□□□□ -1.35
ERCC4-202ENST00000389138 GPRASP1Q5JY77 1395 aa6.59□□□□□ -1.35
ERCC4-202ENST00000389138 AATKQ6ZMQ8 1374 aa6.59□□□□□ -1.35
ERCC4-202ENST00000389138 TULP4Q9NRJ4 1543 aa6.59□□□□□ -1.36
ERCC4-202ENST00000389138 LOC102724428A0A0B4J2F2 783 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 SLC35F4A4IF30 521 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 LRRC10BA6NIK2 292 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 TPP1O14773 563 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 PRKD3O94806 890 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 MYBL2P10244 700 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 CYP2C19P33261 490 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 MRE11P49959 708 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 SIK1P57059 783 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 TMF1P82094 1093 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 SLC9A5Q14940 896 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 PTPN14Q15678 1187 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 C4orf17Q53FE4 359 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 HSP90AB3PQ58FF7 597 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 FAAH2Q6GMR7 532 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 BNC2Q6ZN30 1099 aaPredicted RBP6.58□□□□□ -1.36
ERCC4-202ENST00000389138 TAB3Q8N5C8 712 aaPredicted RBP6.58□□□□□ -1.36
ERCC4-202ENST00000389138 MYCT1Q8N699 235 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 SPATA5Q8NB90 893 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 DDX11Q96FC9 970 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 TIMMDC1Q9NPL8 285 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 CRYL1Q9Y2S2 319 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 DYRK1BQ9Y463 629 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 MYBBP1AQ9BQG0 1328 aaKnown RBP6.58□□□□□ -1.36
ERCC4-202ENST00000389138 KTN1Q86UP2 1357 aaKnown RBP6.58□□□□□ -1.36
ERCC4-202ENST00000389138 PIK3C2GO75747 1445 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 BCL9O00512 1426 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 ITIH6Q6UXX5 1313 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 ADGRF5Q8IZF2 1346 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 A0A1W2PQH9 124 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 TRIM64A6NGJ6 449 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 TRIM64BA6NI03 449 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 SOBPA7XYQ1 873 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 ARAFP10398 606 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 TFE3P19532 575 aaPredicted RBP6.58□□□□□ -1.36
ERCC4-202ENST00000389138 GRK6P43250 576 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 LIG3P49916 1009 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 PSMA6P60900 246 aaKnown RBP6.58□□□□□ -1.36
ERCC4-202ENST00000389138 PTSQ03393 145 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 GRB10Q13322 594 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 SKOR2Q2VWA4 1001 aaPredicted RBP6.58□□□□□ -1.36
ERCC4-202ENST00000389138 PTF1AQ7RTS3 328 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 SLFN12Q8IYM2 578 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 IFT43Q96FT9 208 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 MYLK2Q9H1R3 596 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 ATP6V0A4Q9HBG4 840 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 ZFYVE28Q9HCC9 887 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 CABP1Q9NZU7 370 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 TTLL3Q9Y4R7 772 aa6.58□□□□□ -1.36
ERCC4-202ENST00000389138 COL5A2P05997 1499 aaPredicted RBP6.57□□□□□ -1.36
ERCC4-202ENST00000389138 A0A1B0GTH6 734 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 FAM221AA4D161 298 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 DDX3YO15523 660 aaKnown RBP6.57□□□□□ -1.36
ERCC4-202ENST00000389138 KPNA6O60684 536 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 MT-CO1P00395 513 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 F13A1P00488 732 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 LTFP02788 710 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 POU3F2P20265 443 aaPredicted RBP6.57□□□□□ -1.36
ERCC4-202ENST00000389138 HSD17B7P56937 341 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 CLCQ05315 142 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 IFT88Q13099 833 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 DCTN1Q14203 1278 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 RILPL1Q5EBL4 403 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 HGSNATQ68CP4 663 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 TLDC1Q6P9B6 456 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 GK5Q6ZS86 529 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 SAMD14Q8IZD0 417 aaPredicted RBP6.57□□□□□ -1.36
ERCC4-202ENST00000389138 DNAJC5GQ8N7S2 189 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 IWS1Q96ST2 819 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 TTC1Q99614 292 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 SLC13A1Q9BZW2 595 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 ATP8A2Q9NTI2 1148 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 DCAF16Q9NXF7 216 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 GGA3Q9NZ52 723 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 ARHGAP28Q9P2N2 729 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 PPARGC1AQ9UBK2 798 aaKnown RBP6.57□□□□□ -1.36
ERCC4-202ENST00000389138 STAP2Q9UGK3 403 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 PPP1R9AQ9ULJ8 1098 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 PIK3C2AO00443 1686 aa6.57□□□□□ -1.36
ERCC4-202ENST00000389138 TISP43B9A030 160 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 B9A039 149 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 SNUPNO95149 360 aaKnown RBP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 CELA3AP09093 270 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 RHOQP17081 205 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 XPAP23025 273 aaPredicted RBP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 PLCB4Q15147 1175 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 TXNRD1Q16881 649 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 C11orf91Q3C1V1 193 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 NUGGCQ68CJ6 796 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 TMEM132EQ6IEE7 984 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 TREML1Q86YW5 311 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 FAM43AQ8N2R8 423 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms