RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 ZDBF2Q9HCK1 2354 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 H3BRB1 525 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 RB1P06400 928 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 IRS1P35568 1242 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 VSIG10LQ86VR7 867 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 APBB2Q92870 758 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 IFIH1Q9BYX4 1025 aaKnown RBP24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 TUT1Q9H6E5 874 aaKnown RBP24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 JMJD4Q9H9V9 463 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 VAT1LQ9HCJ6 419 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 DOCK5Q9H7D0 1870 aa24.87■■□□□ 1.57
CNEP1R1-201ENST00000389134 NEDD4P46934 1319 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 TTC3P53804 2025 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 TREHO43280 583 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 SORBS3O60504 671 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 PARP1P09874 1014 aaKnown RBP24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 LTBRP36941 435 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 SMAD2Q15796 467 aaKnown RBP24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 CTC1Q2NKJ3 1217 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 STOX1Q6ZVD7 989 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 SAMD3Q8N6K7 520 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 IL17RAQ96F46 866 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 AMNQ9BXJ7 453 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 LMAN2LQ9H0V9 348 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 MLXIPQ9HAP2 919 aa24.86■■□□□ 1.57
CNEP1R1-201ENST00000389134 C5orf67F2Z3F1 127 aa24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 SMIM10L2AP0DMW4 78 aa24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 SMIM10L2BP0DMW5 78 aa24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 MFAP1P55081 439 aaKnown RBP24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 SP2Q02086 613 aa24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 NMIQ13287 307 aaPredicted RBP24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 FIBCD1Q8N539 461 aa24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 RNPEPQ9H4A4 650 aa24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 RWDD3Q9Y3V2 267 aa24.85■■□□□ 1.57
CNEP1R1-201ENST00000389134 ZNF213O14771 459 aa24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 OPLAHO14841 1288 aa24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 GNAT1P11488 350 aa24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 UBA1P22314 1058 aaKnown RBP24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 CTNNB1P35222 781 aa24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 PDE1AP54750 535 aa24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 PGM5Q15124 567 aa24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 HERC4Q5GLZ8 1057 aaPredicted RBP24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 ANKRD45Q5TZF3 282 aa24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 C11orf84Q9BUA3 381 aaPredicted RBP24.84■■□□□ 1.57
CNEP1R1-201ENST00000389134 KDM4AO75164 1064 aa24.83■■□□□ 1.57
CNEP1R1-201ENST00000389134 CTSHP09668 335 aa24.83■■□□□ 1.57
CNEP1R1-201ENST00000389134 ZSCAN10Q96SZ4 725 aaPredicted RBP24.83■■□□□ 1.57
CNEP1R1-201ENST00000389134 MBTPS2O43462 519 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 LGALS2P05162 132 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 CCND2P30279 289 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 BMPR1AP36894 532 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 ENAHQ8N8S7 591 aaPredicted RBP24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 USP26Q9BXU7 913 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 OSBPL7Q9BZF2 842 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 MUTYHQ9UIF7 546 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 CACNA1HO95180 2353 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 USP34Q70CQ2 3546 aa24.82■■□□□ 1.56
CNEP1R1-201ENST00000389134 TRIM6-TRIM34B2RNG4 842 aa24.81■■□□□ 1.56
CNEP1R1-201ENST00000389134 HYAL1Q12794 435 aa24.81■■□□□ 1.56
CNEP1R1-201ENST00000389134 FAM26DQ5JW98 314 aa24.81■■□□□ 1.56
CNEP1R1-201ENST00000389134 PCDHA1Q9Y5I3 950 aa24.81■■□□□ 1.56
CNEP1R1-201ENST00000389134 NOP56O00567 594 aaKnown RBP24.8■■□□□ 1.56
CNEP1R1-201ENST00000389134 DLX2Q07687 328 aaPredicted RBP24.8■■□□□ 1.56
CNEP1R1-201ENST00000389134 SMAD4Q13485 552 aaKnown RBP24.8■■□□□ 1.56
CNEP1R1-201ENST00000389134 CLUL1Q15846 466 aa24.8■■□□□ 1.56
CNEP1R1-201ENST00000389134 RNF135Q8IUD6 432 aa24.8■■□□□ 1.56
CNEP1R1-201ENST00000389134 IL31RAQ8NI17 732 aa24.8■■□□□ 1.56
CNEP1R1-201ENST00000389134 B4E1Z4 1266 aa24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 GRM6O15303 877 aa24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 HOXA13P31271 388 aaPredicted RBP24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 BMP8AQ7Z5Y6 402 aa24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 EDAQ92838 391 aa24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 GPKOWQ92917 476 aaPredicted RBP eCLIP24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 CLP1Q92989 425 aaKnown RBP24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 MTMR8Q96EF0 704 aa24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 SETD4Q9NVD3 440 aa24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 ZSWIM5Q9P217 1185 aa24.79■■□□□ 1.56
CNEP1R1-201ENST00000389134 STXBP3O00186 592 aa24.78■■□□□ 1.56
CNEP1R1-201ENST00000389134 ZBTB5O15062 677 aa24.78■■□□□ 1.56
CNEP1R1-201ENST00000389134 LINC00271P0C7V0 271 aa24.78■■□□□ 1.56
CNEP1R1-201ENST00000389134 TRAF1Q13077 416 aa24.78■■□□□ 1.56
CNEP1R1-201ENST00000389134 PKN1Q16512 942 aa24.78■■□□□ 1.56
CNEP1R1-201ENST00000389134 SNX27Q96L92 541 aa24.78■■□□□ 1.56
CNEP1R1-201ENST00000389134 CD207Q9UJ71 328 aa24.78■■□□□ 1.56
CNEP1R1-201ENST00000389134 ADGRA3Q8IWK6 1321 aa24.78■■□□□ 1.56
CNEP1R1-201ENST00000389134 CFAP54Q96N23 3096 aa24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 GCOM1H8Y6P7 765 aaPredicted RBP24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 PPP1R11O60927 126 aaPredicted RBP24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 POLR2MP0CAP2 368 aa24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 NEDD9Q14511 834 aa24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 GNPTABQ3T906 1256 aa24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 METTL7BQ6UX53 244 aa24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 STAG2Q8N3U4 1231 aa24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 PRRX2Q99811 253 aa24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 PLVAPQ9BX97 442 aa24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 ZNF215Q9UL58 517 aaPredicted RBP24.77■■□□□ 1.56
CNEP1R1-201ENST00000389134 LOXHD1Q8IVV2 1947 aa24.76■■□□□ 1.55
CNEP1R1-201ENST00000389134 KLRF2D3W0D1 207 aa24.76■■□□□ 1.55
CNEP1R1-201ENST00000389134 ADAM17P78536 824 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms