RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 FAM163AQ96GL9 167 aaPredicted RBP9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PCDHA10Q9Y5I2 948 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PPP2R3BQ9Y5P8 575 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 MYOM1P52179 1685 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 NFIBO00712 420 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 GNAT1P11488 350 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PTPRAP18433 802 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 TERF1P54274 439 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 FANCCQ00597 558 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PLEKHH3Q7Z736 793 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 ASCC2Q9H1I8 757 aaPredicted RBP9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 CBX8Q9HC52 389 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 RIC8AQ9NPQ8 531 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 LZTFL1Q9NQ48 299 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 ARGLU1Q9NWB6 273 aaPredicted RBP9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 RCOR1Q9UKL0 485 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 KBTBD13C9JR72 458 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 H0YCG3 227 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 UPP2O95045 317 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 FAM20AQ96MK3 541 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 ALS2CR12Q96Q35 445 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 LXNQ9BS40 222 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PPP1R9AQ9ULJ8 1098 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 GUCA1BQ9UMX6 200 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 SALL1Q9NSC2 1324 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 MANSC4A6NHS7 340 aaPredicted RBP9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 ESPNB1AK53 854 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 JAK3P52333 1124 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 RGMBQ6NW40 437 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 GIMAP8Q8ND71 665 aaPredicted RBP9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 SCFD2Q8WU76 684 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 PSPC1Q8WXF1 523 aaKnown RBP9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 SRPRBQ9Y5M8 271 aaKnown RBP9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 MRC1P22897 1456 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 CDR1P51861 262 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 PTPN21Q16825 1174 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 NBPF11Q86T75 865 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 MED10Q9BTT4 135 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 SPATC1LQ9H0A9 340 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 DENND3A2RUS2 1198 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 CXCL11O14625 94 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 PPP6R2O75170 966 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 SLFN14P0C7P3 912 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 ACTN2P35609 894 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 KIF5AQ12840 1032 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 SLC30A10Q6XR72 485 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 MSANTD4Q8NCY6 345 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 GLT1D1Q96MS3 346 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 FANCLQ9NW38 375 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 ANAPC4Q9UJX5 808 aa9.31□□□□□ -0.92
CRNKL1-202ENST00000377340 KIF28PB7ZC32 967 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 SLC16A4O15374 487 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 P4HBP07237 508 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 RNASE9P60153 205 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 FAM193AP78312 1265 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 BMS1Q14692 1282 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 SHROOM1Q2M3G4 852 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 HSP90B2PQ58FF3 399 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 CCDC50Q8IVM0 306 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 FBXO16Q8IX29 292 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 EHD4Q9H223 541 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 EMILIN3Q9NT22 766 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 GDAQ9Y2T3 454 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 LTN1O94822 1766 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 EGFRP00533 1210 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 MAPK6Q16659 721 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 UVSSAQ2YD98 709 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 CHST13Q8NET6 341 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 SEPT1Q8WYJ6 367 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 DDX12PQ92771 950 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 KIFAP3Q92845 792 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 IL17RBQ9NRM6 502 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 POLIQ9UNA4 740 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 RGS2P41220 211 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 RCAN1P53805 252 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 TNFAIP2Q03169 654 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 SKIV2LQ15477 1246 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 RRAGAQ7L523 313 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 NOX5Q96PH1 765 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 RBSNQ9H1K0 784 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 MAD2L2Q9UI95 211 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 CCDC117Q8IWD4 279 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
CRNKL1-202ENST00000377340 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 ICAM1P05362 532 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 CASQ1P31415 396 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 MMP14P50281 582 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 USP11P51784 963 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 PSMC5P62195 406 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 PPATQ06203 517 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 PPFIA1Q13136 1202 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 NOGQ13253 232 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 ARL6IP4Q66PJ3 421 aaKnown RBP9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 PPP1R18Q6NYC8 613 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 DCUN1D2Q6PH85 259 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms