RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 GFRA1P56159 465 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 PICALMQ13492 652 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 RAPGEF1Q13905 1077 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 SART3Q15020 963 aaKnown RBP2.29□□□□□ -2.04
UBE2A-203ENST00000371569 LHFPL2Q6ZUX7 228 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 C12orf40Q86WS4 652 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 IL22RA1Q8N6P7 574 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 PJA1Q8NG27 643 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 EVI5LQ96CN4 794 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 WDR18Q9BV38 432 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 TRIM8Q9BZR9 551 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 NKX2-4Q9H2Z4 354 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 ATXN3LQ9H3M9 355 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 CHST12Q9NRB3 414 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 APEX2Q9UBZ4 518 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 ZNF69Q9UC07 566 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 USP25Q9UHP3 1055 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 RCAN3Q9UKA8 241 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 JAG2Q9Y219 1238 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 COL24A1Q17RW2 1714 aa2.29□□□□□ -2.04
UBE2A-203ENST00000371569 DHX57Q6P158 1386 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 C9IYK1 514 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CBX4O00257 560 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 KPNA6O60684 536 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 SNUPNO95149 360 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 TSPAN15O95858 294 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CFBP00751 764 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 TP53P04637 393 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 POLR2BP30876 1174 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 SESN3P58005 492 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ZNF280AP59817 542 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 AUHQ13825 339 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 EXOSC6Q5RKV6 272 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 SLC35F1Q5T1Q4 408 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ZFYVE27Q5T4F4 411 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 NBPF12Q5TAG4 269 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 GDF6Q6KF10 455 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 SLC4A10Q6U841 1118 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CDC37L1Q7L3B6 337 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 FGD2Q7Z6J4 655 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ADAT2Q7Z6V5 191 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CILP2Q8IUL8 1156 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 SPICE1Q8N0Z3 855 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 MFSD2AQ8NA29 543 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 UBE2Q2Q8WVN8 375 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 VWCEQ96DN2 955 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 FUBP3Q96I24 572 aaKnown RBP eCLIP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ARPC5LQ9BPX5 153 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 SYT17Q9BSW7 474 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ASPNQ9BXN1 380 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ZC3H12CQ9C0D7 883 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CCDC8Q9H0W5 538 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 GP6Q9HCN6 339 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CASS4Q9NQ75 786 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 PICK1Q9NRD5 415 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CRIM1Q9NZV1 1036 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ZNF451Q9Y4E5 1061 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ZC3H13Q5T200 1668 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ATP7AQ04656 1500 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 LOC100289279A0A1B0GTE1 492 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CCDC189A1A4V9 331 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 TM4SF5O14894 197 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 PRKD3O94806 890 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ALX3O95076 343 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 IFIT2P09913 472 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 NBPF7P0C2Y1 421 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 RBP3P10745 1247 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 KCNA6P17658 529 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CCND1P24385 295 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 GRIA2P42262 883 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 GJA9P57773 515 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ERVK-21P61565 698 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 TMPRSS15P98073 1019 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 DSG1Q02413 1049 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 KLF1Q13351 362 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 NTRK3Q16288 839 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ARHGAP44Q17R89 818 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ZNF648Q5T619 568 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ACBD5Q5T8D3 534 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 ERICH6BQ5W0A0 696 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 IQSEC1Q6DN90 963 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 GTF2IRD2BQ6EKJ0 949 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 GTF2IRD2Q86UP8 949 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 C11orf74Q86VG3 221 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 FAM43AQ8N2R8 423 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 CPA6Q8N4T0 437 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 SMC1BQ8NDV3 1235 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.28□□□□□ -2.041e-6■■■□□ 16
UBE2A-203ENST00000371569 PANK1Q8TE04 598 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 PPP1R14AQ96A00 147 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 E2F7Q96AV8 911 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 WDR89Q96FK6 387 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 FGD4Q96M96 766 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 STRBPQ96SI9 672 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 SMAD5Q99717 465 aaKnown RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 FOXQ1Q9C009 403 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 RNF208Q9H0X6 261 aa2.28□□□□□ -2.04
UBE2A-203ENST00000371569 GSX1Q9H4S2 264 aaPredicted RBP2.28□□□□□ -2.04
UBE2A-203ENST00000371569 B4GALT6Q9UBX8 382 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms