RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 POTEDQ86YR6 584 aa10.22□□□□□ -0.77
UBE2A-203ENST00000371569 AEBP2Q6ZN18 517 aaPredicted RBP9.24□□□□□ -0.93
UBE2A-203ENST00000371569 CHIC1Q5VXU3 224 aa8.9□□□□□ -0.98
UBE2A-203ENST00000371569 SENP3Q9H4L4 574 aaPredicted RBP8.17□□□□□ -1.1
UBE2A-203ENST00000371569 PHF23Q9BUL5 403 aaPredicted RBP7.89□□□□□ -1.15
UBE2A-203ENST00000371569 POTEHQ6S545 545 aa7.57□□□□□ -1.2
UBE2A-203ENST00000371569 MSH5O43196 834 aa7.51□□□□□ -1.21
UBE2A-203ENST00000371569 FOXD1Q16676 465 aa7.49□□□□□ -1.21
UBE2A-203ENST00000371569 PLSCR2Q9NRY7 297 aa7.18□□□□□ -1.26
UBE2A-203ENST00000371569 CACNB1Q02641 598 aaPredicted RBP7.12□□□□□ -1.27
UBE2A-203ENST00000371569 PIAS4Q8N2W9 510 aaPredicted RBP6.93□□□□□ -1.3
UBE2A-203ENST00000371569 PLPPR3Q6T4P5 718 aa6.83□□□□□ -1.32
UBE2A-203ENST00000371569 PPP6R1Q9UPN7 881 aa6.64□□□□□ -1.35
UBE2A-203ENST00000371569 ADRA2BP18089 450 aa6.63□□□□□ -1.35
UBE2A-203ENST00000371569 DMRT2Q9Y5R5 561 aa6.41□□□□□ -1.38
UBE2A-203ENST00000371569 SCAF1Q9H7N4 1312 aaKnown RBP6.39□□□□□ -1.39
UBE2A-203ENST00000371569 PCDH10Q9P2E7 1040 aa6.22□□□□□ -1.41
UBE2A-203ENST00000371569 DNAJC5BQ9UF47 199 aa6.14□□□□□ -1.43
UBE2A-203ENST00000371569 MAPK8IP2Q13387 824 aaPredicted RBP6.13□□□□□ -1.43
UBE2A-203ENST00000371569 C1QBPQ07021 282 aaKnown RBP6.13□□□□□ -1.43
UBE2A-203ENST00000371569 SP7Q8TDD2 431 aaPredicted RBP6.12□□□□□ -1.43
UBE2A-203ENST00000371569 RNF39Q9H2S5 420 aa6.12□□□□□ -1.43
UBE2A-203ENST00000371569 HOXD11P31277 338 aaPredicted RBP6.07□□□□□ -1.44
UBE2A-203ENST00000371569 DCAF8L1A6NGE4 600 aa5.98□□□□□ -1.45
UBE2A-203ENST00000371569 RNF216Q9NWF9 866 aaPredicted RBP5.95□□□□□ -1.46
UBE2A-203ENST00000371569 CNKSR2Q8WXI2 1034 aa5.92□□□□□ -1.46
UBE2A-203ENST00000371569 PPP4R3CPQ6ZMV5 832 aa5.87□□□□□ -1.47
UBE2A-203ENST00000371569 NCBP3Q53F19 620 aaKnown RBP5.72□□□□□ -1.49
UBE2A-203ENST00000371569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.71□□□□□ -1.5
UBE2A-203ENST00000371569 LHX8Q68G74 356 aa5.71□□□□□ -1.5
UBE2A-203ENST00000371569 APLP2Q06481 763 aa5.67□□□□□ -1.5
UBE2A-203ENST00000371569 DSG3P32926 999 aa5.59□□□□□ -1.51
UBE2A-203ENST00000371569 CAPN15O75808 1086 aa5.53□□□□□ -1.52
UBE2A-203ENST00000371569 RBM42Q9BTD8 480 aaKnown RBP5.52□□□□□ -1.53
UBE2A-203ENST00000371569 U3KPZ7 1027 aaPredicted RBP5.5□□□□□ -1.53
UBE2A-203ENST00000371569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.49□□□□□ -1.53
UBE2A-203ENST00000371569 HNRNPUL2Q1KMD3 747 aaKnown RBP5.49□□□□□ -1.53
UBE2A-203ENST00000371569 ZNF219Q9P2Y4 722 aaPredicted RBP5.49□□□□□ -1.53
UBE2A-203ENST00000371569 CHRDL2Q6WN34 429 aa5.43□□□□□ -1.54
UBE2A-203ENST00000371569 NPM3O75607 178 aaKnown RBP5.42□□□□□ -1.54
UBE2A-203ENST00000371569 SPINK5Q9NQ38 1064 aaPredicted RBP5.42□□□□□ -1.54
UBE2A-203ENST00000371569 POTEMA6NI47 508 aa5.41□□□□□ -1.54
UBE2A-203ENST00000371569 SAMD1Q6SPF0 538 aaPredicted RBP5.38□□□□□ -1.55
UBE2A-203ENST00000371569 POTEGQ6S5H5 508 aa5.32□□□□□ -1.56
UBE2A-203ENST00000371569 TRHP20396 242 aaPredicted RBP5.31□□□□□ -1.56
UBE2A-203ENST00000371569 AKT1S1Q96B36 256 aa5.29□□□□□ -1.56
UBE2A-203ENST00000371569 ZBTB12Q9Y330 459 aaPredicted RBP5.27□□□□□ -1.57
UBE2A-203ENST00000371569 ABCB7O75027 752 aa5.26□□□□□ -1.57
UBE2A-203ENST00000371569 SLC4A2P04920 1241 aa5.22□□□□□ -1.57
UBE2A-203ENST00000371569 HAX1O00165 279 aa5.21□□□□□ -1.58
UBE2A-203ENST00000371569 XP32Q5T750 250 aa5.19□□□□□ -1.58
UBE2A-203ENST00000371569 MYCNP04198 464 aaPredicted RBP5.15□□□□□ -1.58
UBE2A-203ENST00000371569 FXR2P51116 673 aaKnown RBP eCLIP5.14□□□□□ -1.59
UBE2A-203ENST00000371569 PIP4P2Q8N4L2 257 aa5.14□□□□□ -1.59
UBE2A-203ENST00000371569 POLA2Q14181 598 aa5.12□□□□□ -1.59
UBE2A-203ENST00000371569 REM2Q8IYK8 340 aaPredicted RBP5.12□□□□□ -1.59
UBE2A-203ENST00000371569 CLCN6P51797 869 aa5.08□□□□□ -1.6
UBE2A-203ENST00000371569 RBAK-RBAKDNI3L0D1 243 aa5.04□□□□□ -1.6
UBE2A-203ENST00000371569 PITPNM1O00562 1244 aa5.03□□□□□ -1.6
UBE2A-203ENST00000371569 C19orf67A6NJJ6 358 aa5□□□□□ -1.61
UBE2A-203ENST00000371569 SPDYE2BA6NHP3 402 aa4.98□□□□□ -1.61
UBE2A-203ENST00000371569 SPDYE6P0CI01 402 aa4.98□□□□□ -1.61
UBE2A-203ENST00000371569 SPDYE2Q495Y8 402 aa4.98□□□□□ -1.61
UBE2A-203ENST00000371569 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
UBE2A-203ENST00000371569 SPDYE1Q8NFV5 336 aaPredicted RBP4.97□□□□□ -1.61
UBE2A-203ENST00000371569 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
UBE2A-203ENST00000371569 KCNA4P22459 653 aa4.95□□□□□ -1.62
UBE2A-203ENST00000371569 GABBR2O75899 941 aa4.93□□□□□ -1.62
UBE2A-203ENST00000371569 OSCARQ8IYS5 282 aa4.93□□□□□ -1.62
UBE2A-203ENST00000371569 ATXN8OSP0DMR3 200 aa4.93□□□□□ -1.62
UBE2A-203ENST00000371569 FBLN2P98095 1184 aa4.92□□□□□ -1.62
UBE2A-203ENST00000371569 PRKAR2AP13861 404 aaKnown RBP4.91□□□□□ -1.62
UBE2A-203ENST00000371569 EVX2Q03828 476 aa4.89□□□□□ -1.63
UBE2A-203ENST00000371569 FOXD4L1Q9NU39 408 aa4.89□□□□□ -1.63
UBE2A-203ENST00000371569 SSUH2Q9Y2M2 353 aa4.83□□□□□ -1.64
UBE2A-203ENST00000371569 MMRN1Q13201 1228 aa4.81□□□□□ -1.64
UBE2A-203ENST00000371569 ATF5Q9Y2D1 282 aaPredicted RBP4.8□□□□□ -1.64
UBE2A-203ENST00000371569 OTUD5Q96G74 571 aa4.79□□□□□ -1.64
UBE2A-203ENST00000371569 CDAN1Q8IWY9 1227 aa4.79□□□□□ -1.64
UBE2A-203ENST00000371569 CLEC11AQ9Y240 323 aa4.79□□□□□ -1.64
UBE2A-203ENST00000371569 PRR29P0C7W0 189 aa4.77□□□□□ -1.65
UBE2A-203ENST00000371569 DCBLD2Q96PD2 775 aa4.77□□□□□ -1.65
UBE2A-203ENST00000371569 ZNF692Q9BU19 519 aaPredicted RBP4.76□□□□□ -1.65
UBE2A-203ENST00000371569 ZNF579Q8NAF0 562 aaKnown RBP4.76□□□□□ -1.65
UBE2A-203ENST00000371569 CD44P16070 742 aaKnown RBP4.75□□□□□ -1.65
UBE2A-203ENST00000371569 ILDR1Q86SU0 546 aaPredicted RBP4.75□□□□□ -1.65
UBE2A-203ENST00000371569 POTEIP0CG38 1075 aa4.74□□□□□ -1.65
UBE2A-203ENST00000371569 MAMSTRQ6ZN01 415 aa4.74□□□□□ -1.65
UBE2A-203ENST00000371569 SLC4A1APQ9BWU0 796 aaKnown RBP4.73□□□□□ -1.65
UBE2A-203ENST00000371569 FARP1Q9Y4F1 1045 aaPredicted RBP4.72□□□□□ -1.65
UBE2A-203ENST00000371569 DNAJC5Q9H3Z4 198 aa4.72□□□□□ -1.65
UBE2A-203ENST00000371569 STAG3Q9UJ98 1225 aa4.69□□□□□ -1.66
UBE2A-203ENST00000371569 PAK3O75914 559 aaPredicted RBP4.67□□□□□ -1.66
UBE2A-203ENST00000371569 CHADLQ6NUI6 762 aa4.66□□□□□ -1.66
UBE2A-203ENST00000371569 PABPN1Q86U42 306 aaKnown RBP eCLIP4.65□□□□□ -1.67
UBE2A-203ENST00000371569 MKRN4PQ13434 485 aaPredicted RBP4.63□□□□□ -1.67
UBE2A-203ENST00000371569 SLC39A7Q92504 469 aa4.63□□□□□ -1.67
UBE2A-203ENST00000371569 ZRANB1Q9UGI0 708 aa4.63□□□□□ -1.67
UBE2A-203ENST00000371569 C7P10643 843 aa4.63□□□□□ -1.67
UBE2A-203ENST00000371569 NPM1P06748 294 aaKnown RBP eCLIP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms