RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 NEMFO60524 1076 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 PGK1P00558 417 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 ATP2B1P20020 1258 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 RESTQ13127 1097 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 CYFIP1Q7L576 1253 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 SLFN12Q8IYM2 578 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 PCSK9Q8NBP7 692 aaKnown RBP17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 KLHDC9Q8NEP7 349 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 ETNPPLQ8TBG4 499 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 SLC5A5Q92911 643 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 SPATA33Q96N06 139 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 JPH1Q9HDC5 661 aaPredicted RBP17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 KCNMB3Q9NPA1 279 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 TCEAL9Q9UHQ7 104 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 DNM1LO00429 736 aa17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 BAG4O95429 457 aaKnown RBP17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 TOB1P50616 345 aaPredicted RBP17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 ITGB3BPQ13352 177 aaPredicted RBP17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 LRRC41Q15345 812 aa17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 FSCN1Q16658 493 aaKnown RBP17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 GNASQ5JWF2 1037 aa17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 TSEN34Q9BSV6 310 aaKnown RBP17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.41
PRPF38B-202ENST00000370022 MOXD2PA6NHM9 499 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 KBTBD13C9JR72 458 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 NOP56O00567 594 aaKnown RBP17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 CTAGE5O15320 804 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 DHX15O43143 795 aaKnown RBP17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 KPNA6O60684 536 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 F13A1P00488 732 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 MCM7P33993 719 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 CALCRLQ16602 461 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 SLC9A2Q9UBY0 812 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 FRMPD3Q5JV73 1810 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 LAD1O00515 517 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 WNT7AO00755 349 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 MARCH6O60337 910 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 GAS7O60861 476 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 PPFIA4O75335 1185 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 BRD1O95696 1058 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 MMP3P08254 477 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 KRT76Q01546 638 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 ZNF174Q15697 407 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 LRCH2Q5VUJ6 765 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 AFG1LQ8WV93 481 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.57■□□□□ 0.4
PRPF38B-202ENST00000370022 POTEFA5A3E0 1075 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 BMP15O95972 392 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 HOXD8P13378 290 aaPredicted RBP17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 PTGS1P23219 599 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 DDIT3P35638 169 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 NUCB2P80303 420 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 DGKDQ16760 1214 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 CCSAPQ6IQ19 270 aaPredicted RBP17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 ZNF746Q6NUN9 644 aaPredicted RBP17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 SMAP1Q8IYB5 467 aaPredicted RBP17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 HAS1Q92839 578 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 GPR20Q99678 358 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 POLR3EQ9NVU0 708 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 PCDHB6Q9Y5E3 794 aa17.56■□□□□ 0.4
PRPF38B-202ENST00000370022 MYADML2A6NDP7 307 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 PSMD10O75832 226 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 CABYRO75952 493 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 BEX3Q00994 111 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 PKP1Q13835 747 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 KCNA10Q16322 511 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 SEPT1Q8WYJ6 367 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 MTMR9Q96QG7 549 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 BCAS3Q9H6U6 928 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 CEP131Q9UPN4 1083 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 PHF24Q9UPV7 400 aa17.55■□□□□ 0.4
PRPF38B-202ENST00000370022 ELP1O95163 1332 aa17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 ASGR1P07306 291 aa17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 OR52Z1P0C646 297 aa17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 SFNP31947 248 aa17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 ACLYP53396 1101 aa17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 NBR1Q14596 966 aa17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 IPO9Q96P70 1041 aaKnown RBP17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 CIZ1Q9ULV3 898 aaPredicted RBP17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 ATP6V1DQ9Y5K8 247 aa17.54■□□□□ 0.4
PRPF38B-202ENST00000370022 DDX39AO00148 427 aaKnown RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 SORBS3O60504 671 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 ATG7O95352 703 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 PRKCSHP14314 528 aaPredicted RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 EN2P19622 333 aaPredicted RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 PRPHP41219 470 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 JAK3P52333 1124 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 ACTR2P61160 394 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 PTGDRQ13258 359 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 PPP2R5CQ13362 524 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 ATL3Q6DD88 541 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 RDM1Q8NG50 284 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 ZNF396Q96N95 335 aaPredicted RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 PCDHA12Q9UN75 941 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 WDR64B1ANS9 1081 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 TCF7P36402 384 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms