RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 PCDHB6Q9Y5E3 794 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 E7EVH7 732 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 CCDC175P0C221 793 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 CALM1P0DP23 149 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 CALM2P0DP24 149 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 CALM3P0DP25 149 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 MSL3Q8N5Y2 521 aaKnown RBP16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 CAGE1Q8TC20 777 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 MIPOL1Q8TD10 442 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 ACER1Q8TDN7 264 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 C7orf43Q8WVR3 580 aa16.91■□□□□ 0.3
SEMA6C-202ENST00000368912 SHOX2O60902 331 aaPredicted RBP16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 SCG2P13521 617 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 TGFB2P61812 414 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 PLS1Q14651 629 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 UBE2SQ16763 222 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 HHIPL2Q6UWX4 724 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 ILDR2Q71H61 639 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 L3MBTL1Q9Y468 752 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 WNT10BO00744 389 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 CREB3O43889 395 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 COG1Q8WTW3 980 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 DIAPH2O60879 1101 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 ANP32DO95626 131 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 FESP07332 822 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 SF3A3Q12874 501 aaKnown RBP eCLIP16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 WHAMMP3Q1A5X7 153 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 TMTC3Q6ZXV5 915 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 CPLX3Q8WVH0 158 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 PCDHA7Q9UN72 937 aa16.9■□□□□ 0.3
SEMA6C-202ENST00000368912 SMCO2A6NFE2 343 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 TTLL1O95922 423 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 MCM3P25205 808 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 SND1Q7KZF4 910 aaKnown RBP eCLIP16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 FAM228AQ86W67 206 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 RBM41Q96IZ5 413 aaKnown RBP16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 ZDHHC15Q96MV8 337 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 NOD2Q9HC29 1040 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 PPANQ9NQ55 473 aaKnown RBP16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 ORC4O43929 436 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 SEC24CP53992 1094 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 TUBB4BP68371 445 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 IFFO1Q0D2I5 559 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 SETDB1Q15047 1291 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 C16orf86Q6ZW13 317 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 VIPAS39Q9H9C1 493 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 BAZ2AQ9UIF9 1905 aaKnown RBP16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 MYH13Q9UKX3 1938 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 LRRD1A4D1F6 860 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 OPA1O60313 960 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 NAA35Q5VZE5 725 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 NCAPH2Q6IBW4 605 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 TAX1BP1Q86VP1 789 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 NOSTRINQ8IVI9 506 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 TMEM260Q9NX78 707 aa16.89■□□□□ 0.29
SEMA6C-202ENST00000368912 KLHL10Q6JEL2 608 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 GORASP1Q9BQQ3 440 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 ACTR5Q9H9F9 607 aaPredicted RBP16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 SALL1Q9NSC2 1324 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 SORBS3O60504 671 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 RNF8O76064 485 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 NTRK3Q16288 839 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 SDCCAG8Q86SQ7 713 aaPredicted RBP16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 GJA10Q969M2 543 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 SHMT1P34896 483 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 AARSP49588 968 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 RNF168Q8IYW5 571 aaPredicted RBP16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 ZNF473Q8WTR7 871 aaKnown RBP16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 CAPZA3Q96KX2 299 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 SYT17Q9BSW7 474 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 GLIS2Q9BZE0 524 aaPredicted RBP16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
SEMA6C-202ENST00000368912 EARS2Q5JPH6 523 aaKnown RBP16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 NBPF12Q5TAG4 269 aaPredicted RBP16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 SH3BP5LQ7L8J4 393 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 SH2D3CQ8N5H7 860 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 TEKT4Q8WW24 435 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 OSBPL1AQ9BXW6 950 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 AGXT2Q9BYV1 514 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 DNAAF2Q9NVR5 837 aaKnown RBP16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 HACL1Q9UJ83 578 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 IRS2Q9Y4H2 1338 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 SMNDC1O75940 238 aaKnown RBP eCLIP16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 CFBP00751 764 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 GUCY1A3Q02108 690 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 MPP3Q13368 585 aa16.87■□□□□ 0.29
SEMA6C-202ENST00000368912 C15orf52Q6ZUT6 534 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms