RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 FAM217BQ9NTX9 383 aaPredicted RBP11.42□□□□□ -0.58
TPM3-210ENST00000368530 MYO9BQ13459 2157 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 RFXAPO00287 272 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 PFKMP08237 780 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 MYL3P08590 195 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 ATP2A2P16615 1042 aaKnown RBP11.41□□□□□ -0.58
TPM3-210ENST00000368530 COL9A1P20849 921 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 CPT1AP50416 773 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 RPS6P62753 249 aaKnown RBP11.41□□□□□ -0.58
TPM3-210ENST00000368530 ZNF543Q08ER8 600 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 GPNMBQ14956 572 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 PPP2R2DQ66LE6 453 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 CAVIN1Q6NZI2 390 aaKnown RBP11.41□□□□□ -0.58
TPM3-210ENST00000368530 CATIPQ7Z7H3 387 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 CMTR1Q8N1G2 835 aaKnown RBP11.41□□□□□ -0.58
TPM3-210ENST00000368530 CCDC82Q8N4S0 544 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 AIFM3Q96NN9 605 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 CTAGE1Q96RT6 745 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 MTG1Q9BT17 334 aaPredicted RBP11.41□□□□□ -0.58
TPM3-210ENST00000368530 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 GJB4Q9NTQ9 266 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 TFIP11Q9UBB9 837 aaKnown RBP11.41□□□□□ -0.58
TPM3-210ENST00000368530 GBF1Q92538 1859 aa11.41□□□□□ -0.58
TPM3-210ENST00000368530 EPOPA6NHQ4 379 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 ARIH2O95376 493 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
TPM3-210ENST00000368530 CALML3P27482 149 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 KRT85P78386 507 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 SSRP1Q08945 709 aaKnown RBP11.4□□□□□ -0.58
TPM3-210ENST00000368530 NTRK3Q16288 839 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 NFRKBQ6P4R8 1299 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 CCDC62Q6P9F0 684 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 RNF207Q6ZRF8 634 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 DEFB128Q7Z7B8 93 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 FANCBQ8NB91 859 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 OR6J1Q8NGC5 347 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 TBC1D5Q92609 795 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 RAPGEFL1Q9UHV5 662 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 MTCH2Q9Y6C9 303 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 SCN10AQ9Y5Y9 1956 aa11.4□□□□□ -0.58
TPM3-210ENST00000368530 NID2Q14112 1375 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 ZBBXA8MT70 800 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 NKRFO15226 690 aaKnown RBP eCLIP11.4□□□□□ -0.59
TPM3-210ENST00000368530 CA3P07451 260 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 TFF2Q03403 129 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 TMEM87AQ8NBN3 555 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 RGS22Q8NE09 1264 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 DNERQ8NFT8 737 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 PHOSPHO2Q8TCD6 241 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 SCFD2Q8WU76 684 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 PHF12Q96QT6 1004 aa11.4□□□□□ -0.59
TPM3-210ENST00000368530 UHRF1Q96T88 793 aaPredicted RBP11.4□□□□□ -0.59
TPM3-210ENST00000368530 NCOR1O75376 2440 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 BAZ2BQ9UIF8 2168 aaKnown RBP11.39□□□□□ -0.59
TPM3-210ENST00000368530 RBAK-RBAKDNI3L0D1 243 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 KPNA6O60684 536 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 MBD3O95983 291 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 TXNP10599 105 aaKnown RBP11.39□□□□□ -0.59
TPM3-210ENST00000368530 RFC2P35250 354 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 TAP1Q03518 808 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
TPM3-210ENST00000368530 PTPN11Q06124 597 aaPredicted RBP11.39□□□□□ -0.59
TPM3-210ENST00000368530 PPP2R5BQ15173 497 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 SPRED2Q7Z698 418 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 NECAB3Q96P71 396 aaPredicted RBP11.39□□□□□ -0.59
TPM3-210ENST00000368530 CPVLQ9H3G5 476 aa11.39□□□□□ -0.59
TPM3-210ENST00000368530 ZSCAN16Q9H4T2 348 aaPredicted RBP11.39□□□□□ -0.59
TPM3-210ENST00000368530 CCDC196A0A1B0GTZ2 297 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 IFNAR1P17181 557 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 PDE4DQ08499 809 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 KRT40Q6A162 431 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 FBXO18Q8NFZ0 1043 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 KAT2BQ92831 832 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 SPATA32Q96LK8 384 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 KAT14Q9H8E8 782 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 CERS4Q9HA82 394 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 COL20A1Q9P218 1284 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 PNMA2Q9UL42 364 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 STK36Q9NRP7 1315 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 SCN5AQ14524 2016 aa11.38□□□□□ -0.59
TPM3-210ENST00000368530 hCG_1642624A0A1W2PR95 340 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 KIF28PB7ZC32 967 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 LPXNO60711 386 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 DDAH1O94760 285 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 PLEKHA8P1O95397 391 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 GOLGA8HP0CJ92 632 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 CALM1P0DP23 149 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 CALM2P0DP24 149 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 CALM3P0DP25 149 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 KCNQ1P51787 676 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 RCAN1P53805 252 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 ARHGAP1Q07960 439 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 TRIM29Q14134 588 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 TCTN1Q2MV58 587 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms