RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 RAPGEF1Q13905 1077 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 QRICH1Q2TAL8 776 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 USH1GQ495M9 461 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 POTEGQ6S5H5 508 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 POTEEQ6S8J3 1075 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 SYF2O95926 243 aaKnown RBP21.61■■□□□ 1.05
COL13A1-201ENST00000354547 HNRNPH3P31942 346 aaKnown RBP21.61■■□□□ 1.05
COL13A1-201ENST00000354547 FOXR1Q6PIV2 292 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 CCNI2Q6ZMN8 369 aaPredicted RBP21.61■■□□□ 1.05
COL13A1-201ENST00000354547 RPGRIP1Q96KN7 1286 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 ACTN2P35609 894 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 EPS15P42566 896 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 FAM83BQ5T0W9 1011 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 MEX3CQ5U5Q3 659 aaKnown RBP21.61■■□□□ 1.05
COL13A1-201ENST00000354547 CCDC70Q6NSX1 233 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 GOLGA6L1Q8N7Z2 621 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 SPATA4Q8NEY3 305 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 LRRC27Q9C0I9 530 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 ZNF219Q9P2Y4 722 aaPredicted RBP21.61■■□□□ 1.05
COL13A1-201ENST00000354547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL13A1-201ENST00000354547 FAM170AA1A519 330 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 HLA-DOAP06340 250 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 MCM3P25205 808 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 PTPROQ16827 1216 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 SND1Q7KZF4 910 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL13A1-201ENST00000354547 DNAAF5Q86Y56 855 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 KIAA0825Q8IV33 1275 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 DBNDD1Q9H9R9 158 aa21.61■■□□□ 1.05
COL13A1-201ENST00000354547 CLK2P49760 499 aaKnown RBP21.6■■□□□ 1.05
COL13A1-201ENST00000354547 EHHADHQ08426 723 aa21.6■■□□□ 1.05
COL13A1-201ENST00000354547 PSMD2Q13200 908 aa21.6■■□□□ 1.05
COL13A1-201ENST00000354547 PRR16Q569H4 304 aa21.6■■□□□ 1.05
COL13A1-201ENST00000354547 PACSIN2Q9UNF0 486 aaPredicted RBP21.6■■□□□ 1.05
COL13A1-201ENST00000354547 FTCDO95954 541 aa21.6■■□□□ 1.05
COL13A1-201ENST00000354547 SFMBT2Q5VUG0 894 aa21.6■■□□□ 1.05
COL13A1-201ENST00000354547 IQCEQ6IPM2 695 aa21.6■■□□□ 1.05
COL13A1-201ENST00000354547 CCDC65Q8IXS2 484 aa21.6■■□□□ 1.05
COL13A1-201ENST00000354547 TBC1D5Q92609 795 aa21.6■■□□□ 1.05
COL13A1-201ENST00000354547 TLR2O60603 784 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 MED24O75448 989 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 EEF2P13639 858 aaKnown RBP21.59■■□□□ 1.05
COL13A1-201ENST00000354547 GPATCH4Q5T3I0 446 aaKnown RBP21.59■■□□□ 1.05
COL13A1-201ENST00000354547 FAM133AQ8N9E0 248 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 COA1Q9GZY4 146 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 TARSL2A2RTX5 802 aaKnown RBP21.59■■□□□ 1.05
COL13A1-201ENST00000354547 NOL4O94818 638 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 PSMC6P62333 389 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 PABPC4Q13310 644 aaKnown RBP eCLIP21.59■■□□□ 1.05
COL13A1-201ENST00000354547 ADAM9Q13443 819 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 HGSNATQ68CP4 663 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 MED4Q9NPJ6 270 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 EMILIN3Q9NT22 766 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 HYOU1Q9Y4L1 999 aa21.59■■□□□ 1.05
COL13A1-201ENST00000354547 SLC9C1Q4G0N8 1177 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 GOLGA5Q8TBA6 731 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 GJD4Q96KN9 370 aaPredicted RBP21.58■■□□□ 1.05
COL13A1-201ENST00000354547 ANO3Q9BYT9 981 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 PSD3Q9NYI0 1048 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 ADAMTS1Q9UHI8 967 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 LCMT1Q9UIC8 334 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 MYH7BA7E2Y1 1941 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 POLRMTO00411 1230 aaKnown RBP21.58■■□□□ 1.05
COL13A1-201ENST00000354547 ACTN1P12814 892 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 CASP5P51878 434 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 SLC30A10Q6XR72 485 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 SEPT12Q8IYM1 358 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 SCFD1Q8WVM8 642 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 TEKT1Q969V4 418 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 NOX5Q96PH1 765 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 BCAS3Q9H6U6 928 aa21.58■■□□□ 1.05
COL13A1-201ENST00000354547 GDF11O95390 407 aa21.58■■□□□ 1.04
COL13A1-201ENST00000354547 HOXA10P31260 410 aaPredicted RBP21.58■■□□□ 1.04
COL13A1-201ENST00000354547 IRX5P78411 483 aaPredicted RBP21.58■■□□□ 1.04
COL13A1-201ENST00000354547 CYP4A11Q02928 519 aa21.58■■□□□ 1.04
COL13A1-201ENST00000354547 CDC37Q16543 378 aaPredicted RBP21.58■■□□□ 1.04
COL13A1-201ENST00000354547 KCTD19Q17RG1 926 aaPredicted RBP21.58■■□□□ 1.04
COL13A1-201ENST00000354547 ZCWPW2Q504Y3 356 aa21.58■■□□□ 1.04
COL13A1-201ENST00000354547 APOBEC3HQ6NTF7 200 aaKnown RBP21.58■■□□□ 1.04
COL13A1-201ENST00000354547 NT5C3AQ9H0P0 336 aa21.58■■□□□ 1.04
COL13A1-201ENST00000354547 SWAP70Q9UH65 585 aa21.58■■□□□ 1.04
COL13A1-201ENST00000354547 SP8Q8IXZ3 490 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 IQCDQ96DY2 449 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 CRAMP1Q96RY5 1269 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 TLR10Q9BXR5 811 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 PACSIN1Q9BY11 444 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 DNAJC18Q9H819 358 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 PLIN4Q96Q06 1357 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 TAF1LQ8IZX4 1826 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 CYP11B2P19099 503 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 PAFAH1B1P43034 410 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 SLFN13Q68D06 897 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 AFAP1L1Q8TED9 768 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 RABEP2Q9H5N1 569 aa21.57■■□□□ 1.04
COL13A1-201ENST00000354547 RBM12Q9NTZ6 932 aaKnown RBP21.57■■□□□ 1.04
COL13A1-201ENST00000354547 PROM2Q8N271 834 aa21.56■■□□□ 1.04
COL13A1-201ENST00000354547 PALMO75781 387 aa21.56■■□□□ 1.04
COL13A1-201ENST00000354547 SEPT2Q15019 361 aa21.56■■□□□ 1.04
COL13A1-201ENST00000354547 ASTE1Q2TB18 679 aaPredicted RBP21.56■■□□□ 1.04
COL13A1-201ENST00000354547 KLHDC7AQ5VTJ3 777 aa21.56■■□□□ 1.04
COL13A1-201ENST00000354547 PPP1R18Q6NYC8 613 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms