RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 ZNF536O15090 1300 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 A0A1B0GVL5 298 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 ASB14A6NK59 587 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 KIF28PB7ZC32 967 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 TLR3O15455 904 aaKnown RBP8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 SMPD1P17405 629 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 PBX2P40425 430 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 CDK7P50613 346 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 CCL23P55773 120 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 BAATQ14032 418 aaPredicted RBP8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 DHX8Q14562 1220 aaKnown RBP8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 NTRK3Q16288 839 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 MFSD5Q6N075 450 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 ZNF365Q70YC5 407 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 TLK2Q86UE8 772 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 TMEM199Q8N511 208 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 FAM133AQ8N9E0 248 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 CACTINQ8WUQ7 758 aaKnown RBP8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 SDF4Q9BRK5 362 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 ALG1Q9BT22 464 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 CNNM2Q9H8M5 875 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 LY9Q9HBG7 655 aa8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.87□□□□□ -0.99
TM4SF1-201ENST00000305366 B4E1Z4 1266 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 ZBTB43O43298 467 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 PPFIA3O75145 1194 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 ZNF202O95125 648 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 FDX1P10109 184 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 DNAJB2P25686 324 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 U2AF2P26368 475 aaKnown RBP eCLIP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 CALML3P27482 149 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 RCAN1P53805 252 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 NLRP12P59046 1061 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 LRMPQ12912 555 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 PPIGQ13427 754 aaKnown RBP eCLIP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 KRT40Q6A162 431 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 LRRC8AQ8IWT6 810 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 ELOA2Q8IYF1 753 aaPredicted RBP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 TIFAQ96CG3 184 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 KRT23Q9C075 422 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 KATNBL1Q9H079 304 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 TRPV6Q9H1D0 765 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 CYP39A1Q9NYL5 469 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 IMPACTQ9P2X3 320 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 TBX21Q9UL17 535 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 HPSEQ9Y251 543 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 ASTN1O14525 1302 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 GOLGA8AA7E2F4 631 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 CTIFO43310 598 aaKnown RBP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 ZEB2O60315 1214 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 CST5P28325 142 aaPredicted RBP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 GSDMDP57764 484 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 ITGA7Q13683 1181 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 PTPAQ15257 358 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 SYCP1Q15431 976 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 FSCN1Q16658 493 aaKnown RBP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 TKFCQ3LXA3 575 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 TMEM240Q5SV17 173 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 OTOP2Q7RTS6 562 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 AOPEPQ8N6M6 819 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 TMEM47Q9BQJ4 181 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 ZKSCAN3Q9BRR0 538 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 UPF3AQ9H1J1 476 aaKnown RBP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 ZNF576Q9H609 170 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 FAM217BQ9NTX9 383 aaPredicted RBP8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 SYNPO2Q9UMS6 1093 aa8.86□□□□□ -0.99
TM4SF1-201ENST00000305366 UMODL1Q5DID0 1318 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 MROH7Q68CQ1 1323 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 SMTNL1A8MU46 457 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 NFIBO00712 420 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 RIOK3O14730 519 aaKnown RBP8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 IKBKBO14920 756 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 MYL3P08590 195 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 GOLGA8HP0CJ92 632 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 PFKFB1P16118 471 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 IFNAR1P17181 557 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 IGFBP4P22692 258 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 CDC27P30260 824 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 TPM4P67936 248 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 ZRSR1Q15695 479 aaKnown RBP8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 CCDC85BQ15834 202 aaPredicted RBP8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 TMEM67Q5HYA8 995 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 AKNAD1Q5T1N1 836 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 SYDE2Q5VT97 1194 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 IQSEC1Q6DN90 963 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 TAPT1Q6NXT6 567 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 FAM126BQ8IXS8 530 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 WASF1Q92558 559 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 MAP3K14Q99558 947 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 HIPK3Q9H422 1215 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 PRDM12Q9H4Q4 367 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 PRDM6Q9NQX0 595 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 TUBE1Q9UJT0 475 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 GNEQ9Y223 722 aaKnown RBP8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 PAXBP1Q9Y5B6 917 aa8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 BAZ2AQ9UIF9 1905 aaKnown RBP8.85□□□□□ -0.99
TM4SF1-201ENST00000305366 ZBBXA8MT70 800 aa8.84□□□□□ -0.99
TM4SF1-201ENST00000305366 CUTAO60888 179 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms