RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SOX1O00570 391 aaPredicted RBP11.82□□□□□ -0.52
LRTM1-201ENST00000273286 ADCY3O60266 1144 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 POLR3DP05423 398 aaPredicted RBP11.82□□□□□ -0.52
LRTM1-201ENST00000273286 FLT3LGP49771 235 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 FXR1P51114 621 aaKnown RBP eCLIP11.82□□□□□ -0.52
LRTM1-201ENST00000273286 CCDC158Q5M9N0 1113 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 FDX2Q6P4F2 183 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 GLYCTKQ8IVS8 523 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 U2AF1L4Q8WU68 220 aaKnown RBP11.82□□□□□ -0.52
LRTM1-201ENST00000273286 DPF3Q92784 378 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 SHISA4Q96DD7 197 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 ARID3AQ99856 593 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 C7orf69Q9H7B7 122 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 GINM1Q9NU53 330 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 PI4KBQ9UBF8 816 aa11.82□□□□□ -0.52
LRTM1-201ENST00000273286 SGPL1O95470 568 aa11.81□□□□□ -0.52
LRTM1-201ENST00000273286 CAP2P40123 477 aa11.81□□□□□ -0.52
LRTM1-201ENST00000273286 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
LRTM1-201ENST00000273286 UBE2Q1Q7Z7E8 422 aa11.81□□□□□ -0.52
LRTM1-201ENST00000273286 ZNF512BQ96KM6 892 aaPredicted RBP11.81□□□□□ -0.52
LRTM1-201ENST00000273286 PCMTD2Q9NV79 361 aa11.81□□□□□ -0.52
LRTM1-201ENST00000273286 PHIPQ8WWQ0 1821 aa11.81□□□□□ -0.52
LRTM1-201ENST00000273286 TRIOBPQ9H2D6 2365 aa11.81□□□□□ -0.52
LRTM1-201ENST00000273286 METTL12A8MUP2 240 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 H0YGN5 161 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 ASNSP08243 561 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 SSTR4P31391 388 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 MCAMP43121 646 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 ZKSCAN2Q63HK3 967 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 TRIM42Q8IWZ5 723 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 TEX11Q8IYF3 940 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 ZNF384Q8TF68 577 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 FRAT1Q92837 279 aaPredicted RBP11.8□□□□□ -0.52
LRTM1-201ENST00000273286 USP26Q9BXU7 913 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 BRPF3Q9ULD4 1205 aa11.8□□□□□ -0.52
LRTM1-201ENST00000273286 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
LRTM1-201ENST00000273286 HMX2A2RU54 273 aa11.79□□□□□ -0.52
LRTM1-201ENST00000273286 FARP2O94887 1054 aaPredicted RBP11.79□□□□□ -0.52
LRTM1-201ENST00000273286 SPP2Q13103 211 aa11.79□□□□□ -0.52
LRTM1-201ENST00000273286 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
LRTM1-201ENST00000273286 NAA16Q6N069 864 aaPredicted RBP11.79□□□□□ -0.52
LRTM1-201ENST00000273286 FOXP4Q8IVH2 680 aaPredicted RBP11.79□□□□□ -0.52
LRTM1-201ENST00000273286 FAM20CQ8IXL6 584 aa11.79□□□□□ -0.52
LRTM1-201ENST00000273286 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
LRTM1-201ENST00000273286 GABRQQ9UN88 632 aa11.79□□□□□ -0.52
LRTM1-201ENST00000273286 MAST2Q6P0Q8 1798 aa11.79□□□□□ -0.52
LRTM1-201ENST00000273286 PNMA6EA0A0J9YXQ4 647 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 A0A1W2PPC1 479 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 C19orf81C9J6K1 198 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 OS9Q13438 667 aaPredicted RBP11.78□□□□□ -0.52
LRTM1-201ENST00000273286 TNNI3KQ59H18 835 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 PI16Q6UXB8 463 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 WDR18Q9BV38 432 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 KCNF1Q9H3M0 494 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 PAK6Q9NQU5 681 aaPredicted RBP11.78□□□□□ -0.52
LRTM1-201ENST00000273286 TMOD4Q9NZQ9 345 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 FPGT-TNNI3KV9GXZ4 949 aa11.78□□□□□ -0.52
LRTM1-201ENST00000273286 TGFB1P01137 390 aa11.77□□□□□ -0.52
LRTM1-201ENST00000273286 TFRCP02786 760 aaKnown RBP11.77□□□□□ -0.52
LRTM1-201ENST00000273286 HMGCRP04035 888 aa11.77□□□□□ -0.52
LRTM1-201ENST00000273286 ESRRAP11474 423 aaPredicted RBP11.77□□□□□ -0.52
LRTM1-201ENST00000273286 BMP3P12645 472 aa11.77□□□□□ -0.52
LRTM1-201ENST00000273286 HMGCS2P54868 508 aa11.77□□□□□ -0.52
LRTM1-201ENST00000273286 IRX3P78415 501 aaPredicted RBP11.77□□□□□ -0.52
LRTM1-201ENST00000273286 TREML2Q5T2D2 321 aa11.77□□□□□ -0.52
LRTM1-201ENST00000273286 METTL16Q86W50 562 aaKnown RBP11.77□□□□□ -0.52
LRTM1-201ENST00000273286 SSH3Q8TE77 659 aa11.77□□□□□ -0.52
LRTM1-201ENST00000273286 KRTAP4-8Q9BYQ9 185 aa11.77□□□□□ -0.52
LRTM1-201ENST00000273286 SOX17Q9H6I2 414 aaPredicted RBP11.77□□□□□ -0.52
LRTM1-201ENST00000273286 MORF4L1Q9UBU8 362 aa11.77□□□□□ -0.52
LRTM1-201ENST00000273286 GAS2O43903 313 aaKnown RBP11.77□□□□□ -0.53
LRTM1-201ENST00000273286 HLA-DOAP06340 250 aa11.77□□□□□ -0.53
LRTM1-201ENST00000273286 HOXA7P31268 230 aaPredicted RBP11.77□□□□□ -0.53
LRTM1-201ENST00000273286 BACE1P56817 501 aa11.77□□□□□ -0.53
LRTM1-201ENST00000273286 ATP8B2P98198 1209 aa11.77□□□□□ -0.53
LRTM1-201ENST00000273286 RNF43Q68DV7 783 aa11.77□□□□□ -0.53
LRTM1-201ENST00000273286 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
LRTM1-201ENST00000273286 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.53
LRTM1-201ENST00000273286 SH3RF3Q8TEJ3 882 aaPredicted RBP11.77□□□□□ -0.53
LRTM1-201ENST00000273286 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.53
LRTM1-201ENST00000273286 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.53
LRTM1-201ENST00000273286 ASCC2Q9H1I8 757 aaPredicted RBP11.77□□□□□ -0.53
LRTM1-201ENST00000273286 AATFQ9NY61 560 aaKnown RBP eCLIP11.77□□□□□ -0.53
LRTM1-201ENST00000273286 ATAD5Q96QE3 1844 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 LOC100289279A0A1B0GTE1 492 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 SURF6O75683 361 aaKnown RBP11.76□□□□□ -0.53
LRTM1-201ENST00000273286 BCAR3O75815 825 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 CD97P48960 835 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 ECM1Q16610 540 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 BEND4Q6ZU67 534 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 CLEC10AQ8IUN9 316 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 GALNT12Q8IXK2 581 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 DEFB118Q96PH6 123 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 DBNDD2Q9BQY9 259 aa11.76□□□□□ -0.53
LRTM1-201ENST00000273286 FLT1P17948 1338 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 RPTORQ8N122 1335 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 MEGF11A6BM72 1044 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 NDUFB5O43674 189 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 XRCC5P13010 732 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms