RNA–Protein interactions for RNA: ENSMUST00000190080.6

Trerf1-205, Transcript of Transcriptional-regulating factor 1, mousemouse

TSL 1 (best) BASIC

Gene Trerf1, Length 7,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1-205ENSMUST00000190080 Aldh18a1Q9Z110 795 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Lmtk2Q3TYD6 1471 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Tex14Q7M6U3 1450 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Gm14525B1AZA0 212 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Gm2012B1B0R1 212 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Elmsan1E9Q2I4 1089 aaKnown RBP9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 SfnO70456 248 aaKnown RBP9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Serpind1P49182 478 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Wdr36Q3TAQ9 899 aaKnown RBP9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Rnf207Q3V3A7 635 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Gm14819Q62478 212 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Fam160b1Q8CDM8 764 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Fam84aQ9D650 292 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Ehd4Q9EQP2 541 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Syndig1A2ANU3 258 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Zfp90Q61967 636 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Prr18Q6PAN7 307 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Znf507Q6ZPY5 941 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Tubb2aQ7TMM9 445 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Hgh1Q8C3I8 393 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Gnl3Q8CI11 538 aaKnown RBP9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Tubb2bQ9CWF2 445 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Tspan17Q9D7W4 270 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Fem1bQ9Z2G0 627 aa9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Usp42B2RQC2 1324 aaKnown RBP9.91□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Dsg3O35902 993 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Actn3O88990 900 aaKnown RBP9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 CatspereP0DP43 985 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Robo2Q7TPD3 1470 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Hip1Q8VD75 1029 aaKnown RBP9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Cbwd1Q8VEH6 393 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Fam217aQ9D9W6 419 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Pold3Q9EQ28 462 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Rps6ka4Q9Z2B9 773 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 H2afzP0C0S6 128 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 H2afvQ3THW5 128 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 LrmpQ60664 539 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Scfd1Q8BRF7 639 aaKnown RBP9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Cabcoco1Q8CDT7 208 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Rpa3Q9CQ71 121 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Tnfrsf10bQ9QZM4 381 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Rab20P35295 233 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Alox15P39654 663 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Xxylt1Q3U4G3 392 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Sorbs1Q62417 1290 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Armcx2Q6A058 784 aaKnown RBP9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Cyp26b1Q811W2 512 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Kbtbd3Q8BHI4 607 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Grk2Q99MK8 689 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Aldh1b1Q9CZS1 519 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Zranb2Q9R020 330 aaKnown RBP9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Kdm6bQ5NCY0 1641 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Gm5580A0A0N4SVP8 411 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Tex13cD3YU32 604 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Gimap9G3X987 291 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 InhbaQ04998 424 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Prr7Q3V0I2 269 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Ccdc92bQ5SUE3 299 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Cdc37Q61081 379 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Tpd52Q62393 224 aa9.9□□□□□ -0.82
Trerf1-205ENSMUST00000190080 Ccdc153P0C7Q1 202 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Smad1P70340 465 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Papd5Q68ED3 633 aaKnown RBP9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Tex2Q6ZPJ0 1128 aaKnown RBP9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Rnf168Q80XJ2 565 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Ppme1Q8BVQ5 386 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Ushbp1Q8R370 680 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Sugt1Q9CX34 336 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Plekhg1F6S200 1446 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Dnaaf5B9EJR8 853 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 EmbP21995 330 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Sept1P42209 366 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Atp9bP98195 1146 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Mark3Q03141 753 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Trmt10cQ3UFY8 414 aaKnown RBP9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Mylk2Q8VCR8 613 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 St13Q99L47 371 aaKnown RBP9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Mgea5Q9EQQ9 916 aa9.9□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Cul4bA2A432 970 aaKnown RBP9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Gm2237E9Q501 211 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Gm3591K7N6X2 186 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Gm7995L7N2E4 160 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Hoxc10P31257 342 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Cdr2P97817 455 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Cyp2e1Q05421 493 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Q3KNL4 93 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Pnma5Q5DTT8 618 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Krt40Q6IFX3 439 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Trim56Q80VI1 734 aaKnown RBP9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Castor1Q9CWQ8 331 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Msh6P54276 1358 aaKnown RBP9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Myo1eE9Q634 1107 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Pgrmc1O55022 195 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Sema3eP70275 775 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Mindy4Q3UQI9 744 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Ces1eQ64176 562 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Szrd1Q6NXN1 152 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 SybuQ8BHS8 665 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 Bmp2kQ91Z96 1138 aa9.89□□□□□ -0.83
Trerf1-205ENSMUST00000190080 TbcbQ9D1E6 244 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms