RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Itgb7P26011 806 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Nploc4P60670 608 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 A1cfQ5YD48 595 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Cep120Q7TSG1 988 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Clic6Q8BHB9 596 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Nemp2Q8CB65 421 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Twf2Q9Z0P5 349 aaKnown RBP13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Cpb1B2RS76 415 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Hoxc6P10629 235 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Setd4P58467 439 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 YdjcQ14BV6 310 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Slc2a13Q3UHK1 637 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Rnf207Q3V3A7 635 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Slc17a8Q8BFU8 601 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Washc1Q8VDD8 475 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Q91WD4 421 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Krtap5-3Q9D226 196 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Mx2Q9WVP9 655 aa13.68□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Trip11E9Q512 1976 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Atad5Q4QY64 1826 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 TxnP10639 105 aaKnown RBP13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 RragbQ6NTA4 374 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Micall1Q8BGT6 870 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 PycardQ9EPB4 193 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Mrvi1Q9WUX5 899 aaKnown RBP13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Stxbp4Q9WV89 557 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Large1Q9Z1M7 756 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Ccdc173A0JLY1 547 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Adcy5P84309 1262 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Ece1Q4PZA2 769 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Mcph1Q7TT79 822 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Bcas3Q8CCN5 928 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Vnn1Q9Z0K8 512 aa13.67□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Astn1Q61137 1302 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Clec11aO88200 328 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 LtkP08923 888 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Irx2P81066 474 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 NfiaQ02780 532 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Lmntd2Q0VET5 664 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Fscn2Q32M02 492 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Epha7Q61772 998 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Antxr2Q6DFX2 487 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Tdp1Q8BJ37 609 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 GlmnQ8BZM1 596 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Krt82Q99M74 516 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Ppp1r3gQ9CW07 347 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Hic1Q9R1Y5 733 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Myh9Q8VDD5 1960 aaKnown RBP13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 CluhQ5SW19 1315 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Col4a3Q9QZS0 1669 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 AW822073A0A0N4SUK1 652 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 NfkbieO54910 364 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Syt2P46097 422 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Psmc2P46471 433 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Ly9Q01965 654 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Cln3Q61124 438 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Trak2Q6P9N8 913 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Thap3Q8BJ25 218 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Trim47Q8C0E3 641 aa13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Vwa5aQ99KC8 793 aaKnown RBP13.66□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Timm44O35857 452 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Prom1O54990 867 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Rasip1Q3U0S6 961 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Islr2Q5RKR3 745 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Nxf1Q99JX7 618 aaKnown RBP13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Ggps1Q9WTN0 300 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Plcb1Q9Z1B3 1216 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Pdzrn4E9PUZ9 1014 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Ehd2Q8BH64 543 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Cep128Q8BI22 1102 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Krt79Q8VED5 531 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Ddx41Q91VN6 622 aaKnown RBP13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Adgrf4Q9D2L6 698 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Snx29Q9D3S3 818 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Rpap3Q9D706 660 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Plxnb3Q9QY40 1902 aa13.65□□□□□ -0.22
Ddx55-202ENSMUST00000111438 Capn2O08529 700 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Muc1Q02496 630 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Zfp51Q3U4L8 781 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Sun3Q5SS91 320 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Tmc3Q7TQ69 1130 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Cdkn2aipQ8BI72 563 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Ddx19bQ8BZY3 494 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Fermt2Q8CIB5 680 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 H2-Q4Q8HWB2 354 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Nek9Q8K1R7 984 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Ubxn4Q8VCH8 506 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Rsph10bE9PYQ0 876 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Slc7a1Q09143 622 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Tbc1d30Q69ZT9 766 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Btbd7Q8CFE5 1130 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Pde5aQ8CG03 865 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 PdgfcQ8CI19 345 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Bclaf1Q8K019 919 aaKnown RBP13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 MbipQ99LQ1 341 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Utp3Q9JI13 469 aaKnown RBP13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Fam205aA2APU8 1308 aa13.64□□□□□ -0.23
Ddx55-202ENSMUST00000111438 Herc3A6H6S0 1050 aa13.63□□□□□ -0.23
Ddx55-202ENSMUST00000111438 EdnrbP48302 442 aa13.63□□□□□ -0.23
Ddx55-202ENSMUST00000111438 RbsnQ80Y56 783 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms