RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Tbc1d1Q60949 1255 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Defb15Q8R2I5 79 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Hdac11Q91WA3 347 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Scaf11E9PZM7 1456 aaKnown RBP13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Gm29133A0A1B0GT72 266 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Eno1P17182 434 aaKnown RBP13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Miga1Q4QQM5 600 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Trim38Q5SZ99 471 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Kcna6Q61923 529 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 AmphQ7TQF7 686 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Eaf2Q91ZD6 262 aa13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Wdr46Q9Z0H1 622 aaKnown RBP13.59□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Tex14Q7M6U3 1450 aa13.58□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Arhgef40Q3UPH7 1517 aa13.58□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 F13a1Q8BH61 732 aa13.58□□□□□ -0.23
Ccdc88c-201ENSMUST00000068411 Kif21bQ9QXL1 1668 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Rtel1Q0VGM9 1203 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Haus4Q8BFT2 363 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Tmem60Q8K174 133 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Prpsap2Q8R574 369 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Coa7Q921H9 231 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Polr3cQ9D483 533 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 IcoslgQ9JHJ8 322 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ecel1Q9JMI0 775 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Cpsf3Q9QXK7 684 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 A0A286YCQ6 122 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Arl4aP61213 200 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 PigsQ6PD26 555 aaKnown RBP13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 MtbpQ8BJS8 894 aaKnown RBP13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Atp11aP98197 1187 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Trim71Q1PSW8 855 aaKnown RBP13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Fbxo41Q6NS60 873 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Usp8Q80U87 1080 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Casp8O89110 480 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Krt10P02535 570 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ckap2lQ7TS74 745 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Slc17a8Q8BFU8 601 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ints9Q8K114 658 aaKnown RBP13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 CtsqQ91ZF4 343 aa13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Zcrb1Q9CZ96 217 aaKnown RBP13.58□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Mmrn1B2RPV6 1210 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ttc17E9PVB5 1198 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Inf2Q0GNC1 1273 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Lrch2Q3UMG5 773 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 GnptabQ69ZN6 1235 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Hdac4Q6NZM9 1076 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Fam196bQ6GQV1 535 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Baiap3Q80TT2 1134 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Pramel6Q810Y9 485 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 VmacQ8BP01 174 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 3830403N18RikQ9D6C3 208 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Kif24Q6NWW5 1356 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ap1g2O88512 791 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 FosP01101 380 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Sox5P35710 763 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ulk3Q3U3Q1 472 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Asap3Q5U464 904 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Sh3gl3Q62421 347 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Slc44a1Q6X893 653 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 AdarQ99MU3 1178 aaKnown RBP13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Cxcl11Q9JHH5 100 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Atf5O70191 283 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 NficP70255 439 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Serpinb6Q60854 378 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ccdc154Q6RUT8 657 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Acad11Q80XL6 779 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Enox1Q8BHR2 643 aaKnown RBP13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Rps6ka5Q8C050 863 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Agr3Q8R3W7 165 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Gm16486A0A1D5RMD1 1434 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Gm43638A0A0J9YU36 694 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Nphp4P59240 1425 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Kcnk9Q3LS21 402 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Mettl17Q3U2U7 461 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Basp1Q91XV3 226 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ifi35Q9D8C4 286 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 1700016G14RikA0A286YCZ6 238 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 GfapP03995 430 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Tph1P17532 447 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Cage1Q5IR70 849 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Rbm15bQ6PHZ5 887 aaKnown RBP13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Klhl38Q8BSF5 581 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 LrgukQ9D5S7 820 aa13.57□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Olfr552E9Q545 317 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Raph1F2Z3U3 1266 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Sapcd2Q9D818 391 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Veph1A1A535 833 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Mmrn2A6H6E2 943 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Map3k7Q62073 579 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Atp5c1Q91VR2 298 aaKnown RBP13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Prdm2A2A7B5 1709 aaKnown RBP13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 AatkQ80YE4 1365 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Cacnb3P54285 484 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Krt80Q0VBK2 452 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Szrd1Q6NXN1 152 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Trim37Q6PCX9 961 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Slc26a6Q8CIW6 758 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Nudcd3Q8R1N4 363 aa13.56□□□□□ -0.24
Ccdc88c-201ENSMUST00000068411 Ccdc65Q8VHI7 493 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms