RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Surf1P09925 306 aa25.47■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Tal1P22091 329 aa25.47■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Btg1-ps1Q3V0S2 161 aa25.47■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Btg1-ps2Q3V0X0 161 aa25.47■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Nipa1Q8BHK1 323 aa25.47■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Mrpl58Q8R035 206 aa25.47■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Pkd2l2Q9JLG4 621 aa25.47■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Pcdh11xF6ZNL5 1338 aa25.47■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Gm10436L7N1Y3 520 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Slc16a10Q3U9N9 512 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 GsdmeQ9Z2D3 512 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Barx2O08686 283 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Hmgcs2P54869 508 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Nol4P60954 483 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Antxr2Q6DFX2 487 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Trak2Q6P9N8 913 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Sox30Q8CGW4 782 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Tab2Q99K90 693 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Usp26Q99MX1 835 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Cnpy2Q9QXT0 182 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Dctpp1Q9QY93 170 aa25.46■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Fndc3c1Q6DFV6 1356 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 A0A1L1SQF0 893 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ap5z1Q3U829 807 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Znf652Q5DU09 608 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Asic1Q6NXK8 526 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Txndc16Q7TN22 820 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Camsap3Q80VC9 1252 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Pxylp1Q8BHA9 480 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Sun2Q8BJS4 731 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Nemp2Q8CB65 421 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Eps8l1Q8R5F8 716 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Tm4sf4Q91XD3 202 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ctu1Q99J10 420 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Prr14lE9Q7C4 1971 aa25.45■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Zmynd8A2A484 1235 aaKnown RBP25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ess2O70279 479 aa25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 SfnO70456 248 aaKnown RBP25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Rit2P70425 217 aa25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 SelpQ01102 768 aa25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Igdcc3Q8BQC3 813 aa25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 CenpqQ9CPQ5 267 aa25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 TazI7HJS2 263 aa25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ankrd1Q9CR42 319 aa25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Dnajc18Q9CZJ9 357 aa25.44■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Tpm1P58771 284 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Lmntd2Q0VET5 664 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Zdhhc15Q8BGJ0 337 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ddx41Q91VN6 622 aaKnown RBP25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Dqx1Q924H9 718 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Elp3Q9CZX0 547 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 PycardQ9EPB4 193 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Frat1P70339 274 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 IbspQ61711 324 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Panx2Q6IMP4 677 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Nxf1Q99JX7 618 aaKnown RBP25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Magi2Q9WVQ1 1275 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Zbtb12Q9Z150 459 aa25.43■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Kcna2P63141 499 aa25.42■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Taf1bP97358 586 aa25.42■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Krt9Q6RHW0 743 aa25.42■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ubap2lQ80X50 1107 aaKnown RBP25.42■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Cacnb1Q8R3Z5 597 aa25.42■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Cul4bA2A432 970 aaKnown RBP25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 MtrA6H5Y3 1253 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Gm4307E9PZY4 289 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Gm4312K9J7E2 289 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 LtkP08923 888 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 PpardP35396 440 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Slc45a1Q8BIV7 751 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Setdb2Q8C267 713 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Zgrf1Q0VGT4 1863 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Krt36B1AQ75 473 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Syt2P46097 422 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Hoxc13P50207 328 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Mrgprb1Q3UG61 350 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ecm1Q61508 559 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Tmc3Q7TQ69 1130 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Mcph1Q7TT79 822 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Tmx1Q8VBT0 278 aa25.41■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ccdc121E9Q6D3 323 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Stra6O70491 670 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Kcnb1Q03717 857 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ushbp1Q8R370 680 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Mss51Q9D5Z5 446 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Tubb4aQ9D6F9 444 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Zkscan5Q9Z1D8 819 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Gm7168A0AUV4 508 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Arhgap6O54834 987 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Nek1P51954 1203 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Foxn3Q499D0 457 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Epha7Q61772 998 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Ccdc38Q8CDN8 563 aa25.4■■□□□ 1.66
Upf3a-201ENSMUST00000043767 Tbc1d22bQ80VE5 505 aa25.39■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Dlk2Q8K1E3 382 aa25.39■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Xpo4Q9ESJ0 1151 aa25.39■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Jakmip2D3YXK0 820 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Lig1P37913 916 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Trmt1Q3TX08 663 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Trappc3lQ4KL14 181 aa25.38■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms