RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 CUE5Q08412 411 aaKnown RBP2.28□□□□□ -2.04
snR41snR41 RHO2P06781 192 aa2.27□□□□□ -2.05
snR41snR41 CBS1P14066 229 aa2.27□□□□□ -2.05
snR41snR41 OLE1P21147 510 aaKnown RBP2.27□□□□□ -2.05
snR41snR41 SSH4P32343 579 aa2.27□□□□□ -2.05
snR41snR41 THI2P38141 450 aa2.27□□□□□ -2.05
snR41snR41 CCT2P39076 527 aaKnown RBP2.27□□□□□ -2.05
snR41snR41 TFG2P41896 400 aaPredicted RBP2.27□□□□□ -2.05
snR41snR41 CYC3P06182 269 aa2.26□□□□□ -2.05
snR41snR41 POP5P28005 173 aa2.26□□□□□ -2.05
snR41snR41 ECM25P32525 599 aa2.26□□□□□ -2.05
snR41snR41 SEC66P33754 206 aa2.26□□□□□ -2.05
snR41snR41 UTP18P40362 594 aaPredicted RBP2.26□□□□□ -2.05
snR41snR41 SIM1P40472 476 aa2.26□□□□□ -2.05
snR41snR41 YJR085CP47131 105 aaKnown RBP2.26□□□□□ -2.05
snR41snR41 PCP1P53259 346 aa2.26□□□□□ -2.05
snR41snR41 YNR048WP53740 393 aa2.26□□□□□ -2.05
snR41snR41 PLP2Q12017 286 aa2.26□□□□□ -2.05
snR41snR41 YPR022CQ12139 1133 aa2.26□□□□□ -2.05
snR41snR41 TRX2P22803 104 aaKnown RBP2.25□□□□□ -2.05
snR41snR41 DPB3P27344 201 aa2.25□□□□□ -2.05
snR41snR41 REC114P32841 428 aa2.25□□□□□ -2.05
snR41snR41 MRPL10P36520 322 aa2.25□□□□□ -2.05
snR41snR41 ECM27P47144 725 aa2.25□□□□□ -2.05
snR41snR41 UPF3P48412 387 aaKnown RBP2.25□□□□□ -2.05
snR41snR41 RTP1Q12751 981 aa2.25□□□□□ -2.05
snR41snR41 SLY1P22213 666 aa2.24□□□□□ -2.05
snR41snR41 RAD14P28519 371 aa2.24□□□□□ -2.05
snR41snR41 PRP21P32524 280 aaPredicted RBP2.24□□□□□ -2.05
snR41snR41 VMA13P41807 478 aaKnown RBP2.24□□□□□ -2.05
snR41snR41 TWF1P53250 332 aa2.24□□□□□ -2.05
snR41snR41 VPS75P53853 264 aa2.24□□□□□ -2.05
snR41snR41 IOC4Q04213 475 aa2.24□□□□□ -2.05
snR41snR41 HSP31Q04432 237 aa2.24□□□□□ -2.05
snR41snR41 SNX3Q08826 162 aaKnown RBP2.24□□□□□ -2.05
snR41snR41 FOB1O13329 566 aa2.23□□□□□ -2.05
snR41snR41 HIS4P00815 799 aaKnown RBP2.23□□□□□ -2.05
snR41snR41 SPB1P25582 841 aaPredicted RBP2.23□□□□□ -2.05
snR41snR41 MUD1P32605 298 aaKnown RBP2.23□□□□□ -2.05
snR41snR41 AIM10P39965 576 aaKnown RBP2.23□□□□□ -2.05
snR41snR41 RMD9P53140 646 aaKnown RBP2.23□□□□□ -2.05
snR41snR41 DSL1P53847 754 aa2.23□□□□□ -2.05
snR41snR41 YDR239CQ03780 787 aa2.23□□□□□ -2.05
snR41snR41 SGT1Q08446 395 aa2.23□□□□□ -2.05
snR41snR41 TEF1P02994 458 aaKnown RBP2.22□□□□□ -2.05
snR41snR41 ARG4P04076 463 aaPredicted RBP2.22□□□□□ -2.05
snR41snR41 AAC3P18238 307 aa2.22□□□□□ -2.05
snR41snR41 AFG1P32317 509 aa2.22□□□□□ -2.05
snR41snR41 NPL6P32832 435 aa2.22□□□□□ -2.05
snR41snR41 NIP100P33420 868 aa2.22□□□□□ -2.05
snR41snR41 CST26P38226 397 aa2.22□□□□□ -2.05
snR41snR41 YHR131CP38835 850 aa2.22□□□□□ -2.05
snR41snR41 LYS1P38998 373 aaRIP-Chip data2.22□□□□□ -2.05not detected
snR41snR41 YEL057CP39983 233 aa2.22□□□□□ -2.05
snR41snR41 YGR149WP48236 432 aa2.22□□□□□ -2.05
snR41snR41 FRE4P53746 719 aa2.22□□□□□ -2.05
snR41snR41 KTR5P53966 522 aaPredicted RBP2.22□□□□□ -2.05
snR41snR41 YDR387CQ04162 555 aa2.22□□□□□ -2.05
snR41snR41 TOP1P04786 769 aa2.21□□□□□ -2.06
snR41snR41 PRB1P09232 635 aa2.21□□□□□ -2.06
snR41snR41 CSE2P33308 149 aa2.21□□□□□ -2.06
snR41snR41 VID24P38263 362 aa2.21□□□□□ -2.06
snR41snR41 ARE2P53629 642 aaKnown RBP2.21□□□□□ -2.06
snR41snR41 ORT1Q12375 292 aa2.21□□□□□ -2.06
snR41snR41 RMD5Q12508 421 aa2.21□□□□□ -2.06
snR41snR41 CCH1P50077 2039 aa2.2□□□□□ -2.06
snR41snR41 SEC63P14906 663 aa2.2□□□□□ -2.06
snR41snR41 APE2P32454 952 aaKnown RBP2.2□□□□□ -2.06
snR41snR41 CMC1P36064 111 aa2.2□□□□□ -2.06
snR41snR41 VTC2P43585 828 aa2.2□□□□□ -2.06
snR41snR41 VHS1Q03785 461 aa2.2□□□□□ -2.06
snR41snR41 SYF1Q04048 859 aaPredicted RBP2.2□□□□□ -2.06
snR41snR41 YDR056CQ12025 205 aa2.2□□□□□ -2.06
snR41snR41 YLR278CQ05854 1341 aa2.19□□□□□ -2.06
snR41snR41 GCN4P03069 281 aa2.19□□□□□ -2.06
snR41snR41 GPH1P06738 902 aaKnown RBP2.19□□□□□ -2.06
snR41snR41 SPS4P09937 338 aa2.19□□□□□ -2.06
snR41snR41 SNT1P25357 1226 aa2.19□□□□□ -2.06
snR41snR41 OCA4P25366 362 aa2.19□□□□□ -2.06
snR41snR41 SEO1P39709 593 aa2.19□□□□□ -2.06
snR41snR41 MIG3P39943 394 aa2.19□□□□□ -2.06
snR41snR41 MDE1P47095 244 aa2.19□□□□□ -2.06
snR41snR41 GIR2Q03768 265 aaPredicted RBP2.19□□□□□ -2.06
snR41snR41 IES4Q08561 116 aa2.19□□□□□ -2.06
snR41snR41 ATG29Q12092 213 aa2.19□□□□□ -2.06
snR41snR41 IZH2Q12442 317 aa2.19□□□□□ -2.06
snR41snR41 ENT1Q12518 454 aa2.19□□□□□ -2.06
snR41snR41 RIP1P08067 215 aa2.18□□□□□ -2.06
snR41snR41 IDH2P28241 369 aaKnown RBP2.18□□□□□ -2.06
snR41snR41 PMT1P33775 817 aa2.18□□□□□ -2.06
snR41snR41 ARA1P38115 344 aa2.18□□□□□ -2.06
snR41snR41 RFC3P38629 340 aa2.18□□□□□ -2.06
snR41snR41 JLP2P40206 208 aa2.18□□□□□ -2.06
snR41snR41 DFG10P40526 253 aa2.18□□□□□ -2.06
snR41snR41 DOT5P40553 215 aa2.18□□□□□ -2.06
snR41snR41 SAS2P40963 338 aa2.18□□□□□ -2.06
snR41snR41 HXT14P42833 540 aa2.18□□□□□ -2.06
snR41snR41 SKI7Q08491 747 aaPredicted RBP2.18□□□□□ -2.06
snR41snR41 RPI1P23250 407 aaKnown RBP2.17□□□□□ -2.06
snR41snR41 CTR86P25355 563 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms