RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 TGL2P54857 326 aa-0.67□□□□□ -2.52
snR38snR38 YPL113CQ02961 396 aa-0.67□□□□□ -2.52
snR38snR38 TMA16Q08687 178 aa-0.67□□□□□ -2.52
snR38snR38 DDC1Q08949 612 aa-0.67□□□□□ -2.52
snR38snR38 TFC7Q12415 435 aa-0.67□□□□□ -2.52
snR38snR38 YGR161W-CQ3E744 92 aa-0.67□□□□□ -2.52
snR38snR38 ADR1P07248 1323 aa-0.67□□□□□ -2.52
snR38snR38 RPS23AP0CX29 145 aaKnown RBP-0.68□□□□□ -2.52
snR38snR38 RPS23BP0CX30 145 aa-0.68□□□□□ -2.52
snR38snR38 ELO2P25358 347 aa-0.68□□□□□ -2.52
snR38snR38 YBL055CP34220 418 aaPredicted RBP-0.68□□□□□ -2.52
snR38snR38 FRM2P37261 193 aa-0.68□□□□□ -2.52
snR38snR38 CBP4P37267 147 aa-0.68□□□□□ -2.52
snR38snR38 RPL32P38061 130 aaKnown RBP-0.68□□□□□ -2.52
snR38snR38 BNA4P38169 460 aa-0.68□□□□□ -2.52
snR38snR38 ERP2P39704 215 aa-0.68□□□□□ -2.52
snR38snR38 YIL029CP40538 142 aa-0.68□□□□□ -2.52
snR38snR38 ATG18P43601 500 aa-0.68□□□□□ -2.52
snR38snR38 ALK1P43633 760 aaKnown RBP-0.68□□□□□ -2.52
snR38snR38 RPL37BP51402 88 aaKnown RBP-0.68□□□□□ -2.52
snR38snR38 VHT1P53241 593 aa-0.68□□□□□ -2.52
snR38snR38 TRM44Q02648 567 aaKnown RBP-0.68□□□□□ -2.52
snR38snR38 IOC4Q04213 475 aa-0.68□□□□□ -2.52
snR38snR38 PIF1P07271 859 aa-0.69□□□□□ -2.52
snR38snR38 SKG6P32900 734 aaPredicted RBP-0.69□□□□□ -2.52
snR38snR38 YNG2P38806 282 aaKnown RBP-0.69□□□□□ -2.52
snR38snR38 CIN4P39110 191 aa-0.69□□□□□ -2.52
snR38snR38 FAR3P46671 204 aa-0.69□□□□□ -2.52
snR38snR38 BUD13P46947 266 aaPredicted RBP-0.69□□□□□ -2.52
snR38snR38 TRF5P48561 642 aaKnown RBP-0.69□□□□□ -2.52
snR38snR38 HSH155P49955 971 aaKnown RBP-0.69□□□□□ -2.52
snR38snR38 OCA1P50946 238 aaPredicted RBP-0.69□□□□□ -2.52
snR38snR38 SHE4P51534 789 aa-0.69□□□□□ -2.52
snR38snR38 GPG1P53130 126 aa-0.69□□□□□ -2.52
snR38snR38 LCL3P53153 274 aa-0.69□□□□□ -2.52
snR38snR38 CNM67P53865 581 aaKnown RBP-0.69□□□□□ -2.52
snR38snR38 ALF1P53904 254 aa-0.69□□□□□ -2.52
snR38snR38 DPB4Q04603 196 aaKnown RBP-0.69□□□□□ -2.52
snR38snR38 RTN1Q04947 295 aaKnown RBP-0.69□□□□□ -2.52
snR38snR38 PEX30Q06169 523 aa-0.69□□□□□ -2.52
snR38snR38 NCE102Q12207 173 aaRIP-Chip data-0.69□□□□□ -2.52not detected
snR38snR38 CEX1Q12453 761 aa-0.69□□□□□ -2.52
snR38snR38 NAG1Q8TGN9 163 aa-0.69□□□□□ -2.52
snR38snR38 HSH49Q99181 213 aaPredicted RBP-0.69□□□□□ -2.52
snR38snR38 UBR2Q07963 1872 aa-0.69□□□□□ -2.52
snR38snR38 AUS1Q08409 1394 aa-0.7□□□□□ -2.52
snR38snR38 MES1P00958 751 aaKnown RBP-0.7□□□□□ -2.52
snR38snR38 STE7P06784 515 aa-0.7□□□□□ -2.52
snR38snR38 VMA16P23968 213 aa-0.7□□□□□ -2.52
snR38snR38 XRS2P33301 854 aa-0.7□□□□□ -2.52
snR38snR38 MRPL36P36531 177 aa-0.7□□□□□ -2.52
snR38snR38 YBR137WP38276 179 aa-0.7□□□□□ -2.52
snR38snR38 ECM14P38836 430 aa-0.7□□□□□ -2.52
snR38snR38 HAC1P41546 238 aa-0.7□□□□□ -2.52
snR38snR38 BNS1P50084 137 aa-0.7□□□□□ -2.52
snR38snR38 VEL1P53058 206 aa-0.7□□□□□ -2.52
snR38snR38 MST27P53176 234 aa-0.7□□□□□ -2.52
snR38snR38 DRN1P53255 507 aaKnown RBP-0.7□□□□□ -2.52
snR38snR38 CLD1P53264 445 aa-0.7□□□□□ -2.52
snR38snR38 CSL4P53859 292 aaPredicted RBP-0.7□□□□□ -2.52
snR38snR38 IMA3P0CW40 589 aa-0.71□□□□□ -2.52
snR38snR38 IMA4P0CW41 589 aa-0.71□□□□□ -2.52
snR38snR38 PHO80P20052 293 aa-0.71□□□□□ -2.52
snR38snR38 RAD5P32849 1169 aaPredicted RBP-0.71□□□□□ -2.52
snR38snR38 NUP133P36161 1157 aa-0.71□□□□□ -2.52
snR38snR38 TCM62P38228 572 aaKnown RBP-0.71□□□□□ -2.52
snR38snR38 MED6P38782 295 aa-0.71□□□□□ -2.52
snR38snR38 EGT2P42835 1041 aa-0.71□□□□□ -2.52
snR38snR38 MAD3P47074 515 aa-0.71□□□□□ -2.52
snR38snR38 NOP7P53261 605 aaKnown RBP-0.71□□□□□ -2.52
snR38snR38 RHO5P53879 331 aaKnown RBP-0.71□□□□□ -2.52
snR38snR38 SKI8Q02793 397 aaPredicted RBP-0.71□□□□□ -2.52
snR38snR38 INA17Q02888 182 aa-0.71□□□□□ -2.52
snR38snR38 UTP14Q04500 899 aaKnown RBP-0.71□□□□□ -2.52
snR38snR38 RRP9Q06506 573 aaKnown RBP-0.71□□□□□ -2.52
snR38snR38 HIM1Q06674 414 aa-0.71□□□□□ -2.52
snR38snR38 PSR1Q07800 427 aa-0.71□□□□□ -2.52
snR38snR38 IMA2Q08295 589 aa-0.71□□□□□ -2.52
snR38snR38 YGK3Q12222 375 aaPredicted RBP-0.71□□□□□ -2.52
snR38snR38 LDB17Q12342 491 aa-0.71□□□□□ -2.52
snR38snR38 ARG4P04076 463 aaPredicted RBP-0.72□□□□□ -2.52
snR38snR38 CMK2P22517 447 aa-0.72□□□□□ -2.52
snR38snR38 RSA4P25382 515 aaKnown RBP-0.72□□□□□ -2.52
snR38snR38 DBF4P32325 704 aa-0.72□□□□□ -2.52
snR38snR38 PDB1P32473 366 aaKnown RBP-0.72□□□□□ -2.52
snR38snR38 YCR041WP37265 110 aa-0.72□□□□□ -2.52
snR38snR38 RRP4P38792 359 aaKnown RBP-0.72□□□□□ -2.52
snR38snR38 DSE2P38844 325 aa-0.72□□□□□ -2.52
snR38snR38 CCT6P39079 546 aa-0.72□□□□□ -2.52
snR38snR38 PCL7P40186 285 aa-0.72□□□□□ -2.52
snR38snR38 HUA1P40325 198 aa-0.72□□□□□ -2.52
snR38snR38 SEC24P40482 926 aaKnown RBP-0.72□□□□□ -2.52
snR38snR38 MAM33P40513 266 aa-0.72□□□□□ -2.52
snR38snR38 IST3P40565 148 aaPredicted RBP-0.72□□□□□ -2.52
snR38snR38 IME4P41833 600 aa-0.72□□□□□ -2.52
snR38snR38 TRS85P46944 698 aa-0.72□□□□□ -2.52
snR38snR38 RPS7BP48164 190 aaKnown RBP-0.72□□□□□ -2.52
snR38snR38 ZPR1P53303 486 aaKnown RBP-0.72□□□□□ -2.52
snR38snR38 YPL080CQ02826 108 aa-0.72□□□□□ -2.52
snR38snR38 KAP120Q02932 1032 aa-0.72□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms