RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W SHS1Q07657 551 aa1.64□□□□□ -2.15
CTF4YPR135W RCN2Q12044 265 aa1.64□□□□□ -2.15
CTF4YPR135W TGS1Q12052 315 aa1.64□□□□□ -2.15
CTF4YPR135W ULA1Q12059 462 aa1.64□□□□□ -2.15
CTF4YPR135W RPN5Q12250 445 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W NOP58Q12499 511 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W QCR6P00127 147 aa1.64□□□□□ -2.15
CTF4YPR135W ATP2P00830 511 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W PET122P10355 254 aa1.64□□□□□ -2.15
CTF4YPR135W SUI2P20459 304 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W PEP3P27801 918 aa1.64□□□□□ -2.15
CTF4YPR135W KDX1P36005 433 aa1.64□□□□□ -2.15
CTF4YPR135W YSW1P38280 609 aa1.64□□□□□ -2.15
CTF4YPR135W ERC1P38767 581 aa1.64□□□□□ -2.15
CTF4YPR135W ELO1P39540 310 aa1.64□□□□□ -2.15
CTF4YPR135W YJL193WP39542 402 aa1.64□□□□□ -2.15
CTF4YPR135W AVT2P39981 480 aa1.64□□□□□ -2.15
CTF4YPR135W VFA1P40080 203 aa1.64□□□□□ -2.15
CTF4YPR135W SLZ1P40167 298 aa1.64□□□□□ -2.15
CTF4YPR135W SHE4P51534 789 aa1.64□□□□□ -2.15
CTF4YPR135W YPL108WQ02872 168 aaPredicted RBP1.64□□□□□ -2.15
CTF4YPR135W ATG21Q02887 496 aa1.64□□□□□ -2.15
CTF4YPR135W RAD33Q04231 177 aa1.64□□□□□ -2.15
CTF4YPR135W GFD1Q04839 188 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W DON1Q05610 365 aa1.64□□□□□ -2.15
CTF4YPR135W RBS1Q05672 457 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W SWA2Q06677 668 aa1.64□□□□□ -2.15
CTF4YPR135W YDL086WQ07505 273 aa1.64□□□□□ -2.15
CTF4YPR135W BUD7Q08754 746 aa1.64□□□□□ -2.15
CTF4YPR135W PRS5Q12265 496 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W PNO1Q99216 274 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W YOR019WQ99248 730 aa1.64□□□□□ -2.15
CTF4YPR135W YPT6Q99260 215 aa1.64□□□□□ -2.15
CTF4YPR135W MDH1P17505 334 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
CTF4YPR135W VPS33P20795 691 aa1.64□□□□□ -2.15
CTF4YPR135W FEN2P25621 512 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W YCR051WP25631 222 aa1.64□□□□□ -2.15
CTF4YPR135W LOT5P34234 306 aa1.64□□□□□ -2.15
CTF4YPR135W ECM13P38195 257 aa1.64□□□□□ -2.15
CTF4YPR135W GPI16P38875 610 aa1.64□□□□□ -2.15
CTF4YPR135W LSM4P40070 187 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W SER33P40510 469 aa1.64□□□□□ -2.15
CTF4YPR135W CFD1P40558 293 aa1.64□□□□□ -2.15
CTF4YPR135W SOV1Q04748 898 aa1.64□□□□□ -2.15
CTF4YPR135W ARR3Q06598 404 aa1.64□□□□□ -2.15
CTF4YPR135W BSC6Q08280 497 aa1.64□□□□□ -2.15
CTF4YPR135W ARO3P14843 370 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W DAL80P26343 269 aa1.63□□□□□ -2.15
CTF4YPR135W BUD14P27637 709 aa1.63□□□□□ -2.15
CTF4YPR135W MSS1P32559 526 aaPredicted RBP1.63□□□□□ -2.15
CTF4YPR135W RPN2P32565 945 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W SUR1P33300 382 aa1.63□□□□□ -2.15
CTF4YPR135W AUR1P36107 401 aaPredicted RBP1.63□□□□□ -2.15
CTF4YPR135W MNN2P38069 597 aa1.63□□□□□ -2.15
CTF4YPR135W SHE3P38272 425 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W TIM17P39515 158 aa1.63□□□□□ -2.15
CTF4YPR135W EXO1P39875 702 aa1.63□□□□□ -2.15
CTF4YPR135W PFK26P40433 827 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W SHQ1P40486 507 aaPredicted RBP1.63□□□□□ -2.15
CTF4YPR135W DJP1P40564 432 aa1.63□□□□□ -2.15
CTF4YPR135W SEC27P41811 889 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W SSU1P41930 458 aa1.63□□□□□ -2.15
CTF4YPR135W ORC5P50874 479 aa1.63□□□□□ -2.15
CTF4YPR135W OCA1P50946 238 aaPredicted RBP1.63□□□□□ -2.15
CTF4YPR135W SHE10P53075 577 aa1.63□□□□□ -2.15
CTF4YPR135W PIR3Q03180 325 aa1.63□□□□□ -2.15
CTF4YPR135W YLH47Q06493 454 aa1.63□□□□□ -2.15
CTF4YPR135W YDL073WQ07454 984 aa1.63□□□□□ -2.15
CTF4YPR135W YEH1Q07804 573 aa1.63□□□□□ -2.15
CTF4YPR135W GPN2Q08726 347 aaPredicted RBP1.63□□□□□ -2.15
CTF4YPR135W AFI1Q99222 893 aa1.63□□□□□ -2.15
CTF4YPR135W RPL7AP05737 244 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W YML003WP0CF16 290 aa1.63□□□□□ -2.15
CTF4YPR135W ASP3-2P0CX77 362 aa1.63□□□□□ -2.15
CTF4YPR135W ASP3-3P0CX78 362 aa1.63□□□□□ -2.15
CTF4YPR135W ASP3-4P0CX79 362 aa1.63□□□□□ -2.15
CTF4YPR135W ASP3-1P0CZ17 362 aa1.63□□□□□ -2.15
CTF4YPR135W PWP1P21304 576 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W CPR2P23285 205 aa1.63□□□□□ -2.15
CTF4YPR135W SGE1P33335 543 aa1.63□□□□□ -2.15
CTF4YPR135W MAL33P38157 468 aa1.63□□□□□ -2.15
CTF4YPR135W YBL029WP38201 376 aa1.63□□□□□ -2.15
CTF4YPR135W SER3P40054 469 aa1.63□□□□□ -2.15
CTF4YPR135W TMN3P40071 706 aa1.63□□□□□ -2.15
CTF4YPR135W SEC24P40482 926 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W SCD6P45978 349 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15 RIP-Chip
CTF4YPR135W AIP1P46680 615 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W CUE3P53137 624 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W HST1P53685 503 aa1.63□□□□□ -2.15
CTF4YPR135W ARK1P53974 638 aa1.63□□□□□ -2.15
CTF4YPR135W VTC3Q02725 835 aa1.63□□□□□ -2.15
CTF4YPR135W ABZ2Q03266 374 aa1.63□□□□□ -2.15
CTF4YPR135W EFR3Q03653 782 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W UFO1Q04511 668 aa1.63□□□□□ -2.15
CTF4YPR135W DBP9Q06218 594 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W TLG2Q08144 397 aa1.63□□□□□ -2.15
CTF4YPR135W UAF30Q08747 228 aa1.63□□□□□ -2.15
CTF4YPR135W LEU9Q12166 604 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W RPL7BQ12213 244 aaKnown RBP1.63□□□□□ -2.15
CTF4YPR135W SUC2P00724 532 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms