RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	UTR4	P32626	227 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	RAD24	P32641	659 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	YBL028C	P38202	106 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	MSG5	P38590	489 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	GPI16	P38875	610 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	YHR218W	P38899	603 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	YMR124W	P39523	943 aa	Known RBP	4.23	□□□□□ -1.73
CMR3	YPR013C	GAT2	P40209	560 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	PHO86	P46956	311 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	RRP46	P53256	223 aa	Predicted RBP	4.23	□□□□□ -1.73
CMR3	YPR013C	ATP23	P53722	227 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	EKI1	Q03764	534 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	CAC2	Q04199	468 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	MRPL1	Q04599	285 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	NSE1	Q07913	336 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	YIL002W-A	Q3E7Z5	69 aa		4.23	□□□□□ -1.73
CMR3	YPR013C	CBP2	P03874	630 aa	Predicted RBP	4.22	□□□□□ -1.73
CMR3	YPR013C	NFT1	P0CE68	1218 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	GCD2	P12754	651 aa	Predicted RBP	4.22	□□□□□ -1.73
CMR3	YPR013C	URE2	P23202	354 aa	Known RBP	4.22	□□□□□ -1.73
CMR3	YPR013C	COQ3	P27680	312 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CMR3	YPR013C	RRP4	P38792	359 aa	Known RBP	4.22	□□□□□ -1.73
CMR3	YPR013C	VPS45	P38932	577 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	VPS25	P47142	202 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	MPS2	P53159	387 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	GPI1	P53306	609 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	YIF1	P53845	314 aa	Known RBP	4.22	□□□□□ -1.73
CMR3	YPR013C	NUP100	Q02629	959 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	ABZ2	Q03266	374 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	YDR387C	Q04162	555 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	VPS20	Q04272	221 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	MSC3	Q05812	728 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	PHO92	Q06390	306 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	GSH2	Q08220	491 aa		4.22	□□□□□ -1.73
CMR3	YPR013C	RPI1	P23250	407 aa	Known RBP	4.21	□□□□□ -1.74
CMR3	YPR013C	RPS2	P25443	254 aa	Known RBP	4.21	□□□□□ -1.74
CMR3	YPR013C	ADY2	P25613	283 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	SMY1	P32364	656 aa	Known RBP	4.21	□□□□□ -1.74
CMR3	YPR013C	FLO10	P36170	1169 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	YHR131C	P38835	850 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	SSO2	P39926	295 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	FAU1	P40099	211 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	YPS6	P40583	537 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	PAC11	P40960	533 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	BRO1	P48582	844 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	SLI1	P53304	468 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	EGD1	Q02642	157 aa	Known RBP	4.21	□□□□□ -1.74
CMR3	YPR013C	TAF12	Q03761	539 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	IVY1	Q04934	453 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	GLO2	Q05584	274 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	DIC1	Q06143	298 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	RAD61	Q99359	647 aa		4.21	□□□□□ -1.74
CMR3	YPR013C	CDC21	P06785	304 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	SAM1	P10659	382 aa	Known RBP	4.2	□□□□□ -1.74
CMR3	YPR013C	PUT4	P15380	627 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	SAG1	P20840	650 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	YCR007C	P25354	239 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	APE2	P32454	952 aa	Known RBP	4.2	□□□□□ -1.74
CMR3	YPR013C	CYS4	P32582	507 aa	Known RBP	4.2	□□□□□ -1.74
CMR3	YPR013C	YSC83	P32792	385 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	VPS17	P32913	551 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	QDR3	P38227	689 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	LEU5	P38702	357 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	INM1	P38710	295 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	LIN1	P38852	340 aa	Predicted RBP	4.2	□□□□□ -1.74
CMR3	YPR013C	YFR018C	P43599	363 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	TRS85	P46944	698 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	YNL234W	P53857	426 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	LGE1	Q02796	332 aa	Known RBP	4.2	□□□□□ -1.74
CMR3	YPR013C	SLD5	Q03406	294 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	SMA2	Q04658	369 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	ORM2	Q06144	216 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	RLP24	Q07915	199 aa	Known RBP	4.2	□□□□□ -1.74
CMR3	YPR013C	ARP6	Q12509	438 aa		4.2	□□□□□ -1.74
CMR3	YPR013C	HIS4	P00815	799 aa	Known RBP	4.19	□□□□□ -1.74
CMR3	YPR013C	GAL4	P04386	881 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	CDC37	P06101	506 aa	Known RBP	4.19	□□□□□ -1.74
CMR3	YPR013C	GAL7	P08431	366 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	PET18	P25362	215 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	GID7	P25569	745 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	PPZ1	P26570	692 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	PSO2	P30620	661 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	PHD1	P36093	366 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	MNN9	P39107	395 aa	Known RBP	4.19	□□□□□ -1.74
CMR3	YPR013C	IDP3	P53982	420 aa	Known RBP	4.19	□□□□□ -1.74
CMR3	YPR013C	GIP3	Q03016	1276 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	YLR112W	Q12130	139 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	YLL056C	Q12177	298 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	PNS1	Q12412	539 aa		4.19	□□□□□ -1.74
CMR3	YPR013C	VPS63	O13549	108 aa		4.18	□□□□□ -1.74
CMR3	YPR013C	CHS1	P08004	1131 aa		4.18	□□□□□ -1.74
CMR3	YPR013C	THR4	P16120	514 aa	Known RBP	4.18	□□□□□ -1.74
CMR3	YPR013C	RAD57	P25301	460 aa		4.18	□□□□□ -1.74
CMR3	YPR013C	BUB3	P26449	341 aa		4.18	□□□□□ -1.74
CMR3	YPR013C	PTK1	P36002	662 aa	Predicted RBP	4.18	□□□□□ -1.74
CMR3	YPR013C	SPP381	P38282	291 aa	Predicted RBP	4.18	□□□□□ -1.74
CMR3	YPR013C	TOM71	P38825	639 aa	Known RBP	4.18	□□□□□ -1.74
CMR3	YPR013C	YER079W	P40052	210 aa	Known RBP	4.18	□□□□□ -1.74
CMR3	YPR013C	RPN14	P53196	417 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms