RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W MPS3P47069 682 aa3.51□□□□□ -1.85
MSD1YPL104W BNA2P47125 453 aa3.51□□□□□ -1.85
MSD1YPL104W SWC4P53201 476 aa3.51□□□□□ -1.85
MSD1YPL104W YGR016WP53209 190 aa3.51□□□□□ -1.85
MSD1YPL104W TNA1P53322 534 aa3.51□□□□□ -1.85
MSD1YPL104W NCE103P53615 221 aa3.51□□□□□ -1.85
MSD1YPL104W IMP4P53941 290 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W RPM2Q02773 1202 aa3.51□□□□□ -1.85
MSD1YPL104W CCE1Q03702 353 aa3.51□□□□□ -1.85
MSD1YPL104W TPP1Q03796 238 aa3.51□□□□□ -1.85
MSD1YPL104W TY1A-MR1Q04215 440 aa3.51□□□□□ -1.85
MSD1YPL104W HBT1Q07653 1046 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W MUM3Q08750 479 aa3.51□□□□□ -1.85
MSD1YPL104W YDR056CQ12025 205 aa3.51□□□□□ -1.85
MSD1YPL104W SLF1Q12034 447 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W Q0142Q9ZZW4 58 aa3.51□□□□□ -1.85
MSD1YPL104W PHO5P00635 467 aa3.51□□□□□ -1.85
MSD1YPL104W CDC21P06785 304 aa3.51□□□□□ -1.85
MSD1YPL104W SPT3P06844 337 aa3.51□□□□□ -1.85
MSD1YPL104W CPA1P07258 411 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W SNF5P18480 905 aa3.51□□□□□ -1.85
MSD1YPL104W EPT1P22140 391 aa3.51□□□□□ -1.85
MSD1YPL104W SGF29P25554 259 aa3.51□□□□□ -1.85
MSD1YPL104W CIN8P27895 1000 aa3.51□□□□□ -1.85
MSD1YPL104W CBF5P33322 483 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
MSD1YPL104W ALG14P38242 237 aa3.51□□□□□ -1.85
MSD1YPL104W IST2P38250 946 aa3.51□□□□□ -1.85
MSD1YPL104W CEM1P39525 442 aa3.51□□□□□ -1.85
MSD1YPL104W IMA5P40884 581 aa3.51□□□□□ -1.85
MSD1YPL104W YFR018CP43599 363 aa3.51□□□□□ -1.85
MSD1YPL104W STB2P46679 850 aa3.51□□□□□ -1.85
MSD1YPL104W GET1P53192 235 aa3.51□□□□□ -1.85
MSD1YPL104W COG7P53195 279 aa3.51□□□□□ -1.85
MSD1YPL104W MOT3P54785 490 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W MMT1Q03218 510 aa3.51□□□□□ -1.85
MSD1YPL104W TAF3Q12297 353 aa3.51□□□□□ -1.85
MSD1YPL104W YBR182C-AQ8TGU6 64 aa3.51□□□□□ -1.85
MSD1YPL104W CCH1P50077 2039 aa3.5□□□□□ -1.85
MSD1YPL104W THP2O13539 261 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W HXK2P04807 486 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W TUB1P09733 447 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W MSS116P15424 664 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W CLB4P24871 460 aa3.5□□□□□ -1.85
MSD1YPL104W ERG6P25087 383 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W OCA4P25366 362 aa3.5□□□□□ -1.85
MSD1YPL104W STE14P32584 239 aa3.5□□□□□ -1.85
MSD1YPL104W PMT1P33775 817 aa3.5□□□□□ -1.85
MSD1YPL104W AST1P35183 429 aa3.5□□□□□ -1.85
MSD1YPL104W FRE2P36033 711 aa3.5□□□□□ -1.85
MSD1YPL104W RPF2P36160 344 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W IML3P38265 245 aa3.5□□□□□ -1.85
MSD1YPL104W CYC2P38909 366 aa3.5□□□□□ -1.85
MSD1YPL104W SER33P40510 469 aa3.5□□□□□ -1.85
MSD1YPL104W GVP36P40531 326 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W SEC27P41811 889 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W NOP9P47077 666 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W GTO1P48239 356 aa3.5□□□□□ -1.85
MSD1YPL104W YPT32P51996 222 aaKnown RBP3.5□□□□□ -1.85
MSD1YPL104W DIA3P52290 468 aa3.5□□□□□ -1.85
MSD1YPL104W YGL108CP53139 140 aa3.5□□□□□ -1.85
MSD1YPL104W GPI1P53306 609 aa3.5□□□□□ -1.85
MSD1YPL104W ECM11Q04110 302 aa3.5□□□□□ -1.85
MSD1YPL104W YMR111CQ04461 462 aaPredicted RBP3.5□□□□□ -1.85
MSD1YPL104W GMC2Q06201 188 aa3.5□□□□□ -1.85
MSD1YPL104W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
MSD1YPL104W RRP42Q12277 265 aaPredicted RBP3.5□□□□□ -1.85
MSD1YPL104W RPS9AO13516 197 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W SUC2P00724 532 aa3.49□□□□□ -1.85
MSD1YPL104W AI3P03877 415 aa3.49□□□□□ -1.85
MSD1YPL104W ARG3P05150 338 aa3.49□□□□□ -1.85
MSD1YPL104W MSF1P08425 469 aa3.49□□□□□ -1.85
MSD1YPL104W RPS4AP0CX35 261 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W RPS4BP0CX36 261 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W MET8P15807 274 aa3.49□□□□□ -1.85
MSD1YPL104W RVS161P25343 265 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W RSC6P25632 483 aa3.49□□□□□ -1.85
MSD1YPL104W RFA2P26754 273 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W FUN30P31380 1131 aa3.49□□□□□ -1.85
MSD1YPL104W ATP11P32453 318 aa3.49□□□□□ -1.85
MSD1YPL104W SDH3P33421 198 aa3.49□□□□□ -1.85
MSD1YPL104W RMA1P36001 430 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W PDX3P38075 228 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W ROT2P38138 954 aa3.49□□□□□ -1.85
MSD1YPL104W UBA4P38820 440 aa3.49□□□□□ -1.85
MSD1YPL104W GIP4P39732 760 aa3.49□□□□□ -1.85
MSD1YPL104W LSM5P40089 93 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W AYR1P40471 297 aa3.49□□□□□ -1.85
MSD1YPL104W MEP2P41948 499 aa3.49□□□□□ -1.85
MSD1YPL104W PTR3P43606 678 aa3.49□□□□□ -1.85
MSD1YPL104W ASK10P48361 1146 aa3.49□□□□□ -1.85
MSD1YPL104W MEP3P53390 489 aa3.49□□□□□ -1.85
MSD1YPL104W YNL260CP53846 198 aa3.49□□□□□ -1.85
MSD1YPL104W YNL033WP53964 284 aa3.49□□□□□ -1.85
MSD1YPL104W YNL019CP53975 284 aa3.49□□□□□ -1.85
MSD1YPL104W ARX1Q03862 593 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W RPC11Q04307 110 aaPredicted RBP3.49□□□□□ -1.85
MSD1YPL104W YDR124WQ04608 324 aa3.49□□□□□ -1.85
MSD1YPL104W RAD34Q06665 692 aa3.49□□□□□ -1.85
MSD1YPL104W TSR2Q06672 205 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W PUS7Q08647 676 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 141.1 ms