RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	SAM4	Q08985	325 aa	Known RBP	5.77	□□□□□ -1.49
VMA4	YOR332W	YDL176W	Q12027	708 aa		5.77	□□□□□ -1.49
VMA4	YOR332W	DAP2	P18962	818 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	GIT1	P25346	518 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	YCL049C	P25577	312 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	PTC6	P25646	442 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	LYP1	P32487	611 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	MAK5	P38112	773 aa	Predicted RBP	5.76	□□□□□ -1.49
VMA4	YOR332W	YBR284W	P38150	797 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	FMP23	P38231	175 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	ARN2	P38724	620 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	EFM1	P38732	585 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	TAT2	P38967	592 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	YAR028W	P39548	234 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	GAB1	P41733	394 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	GYP8	P43570	497 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	GLG2	P47011	380 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	TIS11	P47977	285 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	GTO1	P48239	356 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	SAP4	P53036	818 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	TYW3	P53177	273 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	SMA1	Q02651	245 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	RCF1	Q03713	159 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	YDR132C	Q03900	495 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	YLR225C	Q05948	407 aa	Known RBP	5.76	□□□□□ -1.49
VMA4	YOR332W	YPR196W	Q06595	470 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	MFG1	Q07684	458 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	THP3	Q12049	470 aa	Known RBP	5.76	□□□□□ -1.49
VMA4	YOR332W	NFI1	Q12216	726 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	YGK3	Q12222	375 aa	Predicted RBP	5.76	□□□□□ -1.49
VMA4	YOR332W	PST2	Q12335	198 aa	Known RBP	5.76	□□□□□ -1.49
VMA4	YOR332W	RPN6	Q12377	434 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	MDM12	Q92328	271 aa		5.76	□□□□□ -1.49
VMA4	YOR332W	TIM9	O74700	87 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	CDC31	P06704	161 aa	Known RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	ATP1	P07251	545 aa	Known RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	CIT2	P08679	460 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	VPS33	P20795	691 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	CSE2	P33308	149 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	STB6	P36085	766 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	DRE2	P36152	348 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	POL12	P38121	705 aa	Predicted RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	GPX2	P38143	162 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	ATG14	P38270	344 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	URA8	P38627	578 aa	Predicted RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
VMA4	YOR332W	DHH1	P39517	506 aa	Known RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	UTP18	P40362	594 aa	Predicted RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	SER33	P40510	469 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	ALR2	P43553	858 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	GCV2	P49095	1034 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	YPT32	P51996	222 aa	Known RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	SNF12	P53628	566 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	CPR8	P53728	308 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	IGO1	P53897	168 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	GRX5	Q02784	150 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	ABZ2	Q03266	374 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	MUS81	Q04149	632 aa	Predicted RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	ECM22	Q05958	814 aa	Predicted RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	YPS7	Q06325	596 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	THP1	Q08231	455 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	MCA1	Q08601	432 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	BBP1	Q12365	385 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	YOR131C	Q12486	218 aa		5.75	□□□□□ -1.49
VMA4	YOR332W	HTZ1	Q12692	134 aa	Known RBP	5.75	□□□□□ -1.49
VMA4	YOR332W	SPS1	P08458	490 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	GAL3	P13045	520 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	SAC7	P17121	654 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	HIR2	P32480	875 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	MEI5	P32489	222 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	MKK2	P32491	506 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	THI80	P35202	319 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	CTF13	P35203	478 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	ADD66	P36040	267 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	YBR056W	P38081	501 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	LDB7	P38210	180 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	YHR078W	P38799	552 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	DDI1	P40087	428 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	RGI2	P40188	164 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	MPM1	P40364	252 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	ARF3	P40994	183 aa	RIP-Chip data	5.74	□□□□□ -1.49	not detected
VMA4	YOR332W	SKP2	P42843	763 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	AIM23	P47015	356 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	TIM54	P47045	478 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	GCV1	P48015	400 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	GPI8	P49018	411 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	COG1	P53079	417 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	COP1	P53622	1201 aa	Known RBP	5.74	□□□□□ -1.49
VMA4	YOR332W	PIR3	Q03180	325 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	PFA5	Q03289	374 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	PPN1	Q04119	674 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	RNH1	Q04740	348 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	YLR345W	Q06137	509 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	NEJ1	Q06148	342 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	VTA1	Q06263	330 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	ARR1	Q06596	294 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	GSH2	Q08220	491 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	YOL131W	Q08270	108 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	SVS1	Q12254	260 aa		5.74	□□□□□ -1.49
VMA4	YOR332W	HSP42	Q12329	375 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 144.2 ms