RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W NIP100P33420 868 aa4.01□□□□□ -1.77
VAM3YOR106W PIM1P36775 1133 aa4.01□□□□□ -1.77
VAM3YOR106W OTU2P38747 307 aaKnown RBP4.01□□□□□ -1.77
VAM3YOR106W VTC2P43585 828 aa4.01□□□□□ -1.77
VAM3YOR106W JJJ1P53863 590 aa4.01□□□□□ -1.77
VAM3YOR106W MDG1P53885 366 aa4.01□□□□□ -1.77
VAM3YOR106W YDR387CQ04162 555 aa4.01□□□□□ -1.77
VAM3YOR106W MHR1Q06630 226 aa4.01□□□□□ -1.77
VAM3YOR106W TIM18Q08749 192 aa4.01□□□□□ -1.77
VAM3YOR106W RAD61Q99359 647 aa4.01□□□□□ -1.77
VAM3YOR106W YLR278CQ05854 1341 aa4□□□□□ -1.77
VAM3YOR106W MRP7P12687 371 aa4□□□□□ -1.77
VAM3YOR106W DAL2P25335 343 aa4□□□□□ -1.77
VAM3YOR106W RVS161P25343 265 aaKnown RBP4□□□□□ -1.77
VAM3YOR106W TIP1P27654 210 aaPredicted RBP4□□□□□ -1.77
VAM3YOR106W ECM25P32525 599 aa4□□□□□ -1.77
VAM3YOR106W ECM27P47144 725 aa4□□□□□ -1.77
VAM3YOR106W HER2Q03557 464 aa4□□□□□ -1.77
VAM3YOR106W HSP31Q04432 237 aa4□□□□□ -1.77
VAM3YOR106W HRI1Q05905 244 aaKnown RBP4□□□□□ -1.77
VAM3YOR106W RRI2Q12348 645 aa4□□□□□ -1.77
VAM3YOR106W ADH2P00331 348 aaKnown RBP3.99□□□□□ -1.77
VAM3YOR106W HIS4P00815 799 aaKnown RBP3.99□□□□□ -1.77
VAM3YOR106W RPI1P23250 407 aaKnown RBP3.99□□□□□ -1.77
VAM3YOR106W MTC6P38849 526 aa3.99□□□□□ -1.77
VAM3YOR106W BSC6Q08280 497 aa3.99□□□□□ -1.77
VAM3YOR106W YPR022CQ12139 1133 aa3.99□□□□□ -1.77
VAM3YOR106W CDC60P26637 1090 aaKnown RBP3.98□□□□□ -1.77
VAM3YOR106W PRP21P32524 280 aaPredicted RBP3.98□□□□□ -1.77
VAM3YOR106W CCT2P39076 527 aaKnown RBP3.98□□□□□ -1.77
VAM3YOR106W YIF1P53845 314 aaKnown RBP3.98□□□□□ -1.77
VAM3YOR106W KTR5P53966 522 aaPredicted RBP3.98□□□□□ -1.77
VAM3YOR106W RBD2Q12270 262 aa3.98□□□□□ -1.77
VAM3YOR106W TOP1P04786 769 aa3.97□□□□□ -1.77
VAM3YOR106W GPH1P06738 902 aaKnown RBP3.97□□□□□ -1.77
VAM3YOR106W HXT1P32465 570 aa3.97□□□□□ -1.77
VAM3YOR106W SPR1P32603 445 aa3.97□□□□□ -1.77
VAM3YOR106W VHC1P38329 1120 aa3.97□□□□□ -1.77
VAM3YOR106W PAN6P40459 309 aa3.97□□□□□ -1.77
VAM3YOR106W VMA13P41807 478 aaKnown RBP3.97□□□□□ -1.77
VAM3YOR106W TIS11P47977 285 aa3.97□□□□□ -1.77
VAM3YOR106W PPM1Q04081 328 aa3.97□□□□□ -1.77
VAM3YOR106W RPL3P14126 387 aaKnown RBP3.96□□□□□ -1.78
VAM3YOR106W PPH22P23595 377 aa3.96□□□□□ -1.78
VAM3YOR106W MNS1P32906 549 aa3.96□□□□□ -1.78
VAM3YOR106W YHR054CP38780 354 aa3.96□□□□□ -1.78
VAM3YOR106W SMF1P38925 575 aa3.96□□□□□ -1.78
VAM3YOR106W MNP1P53163 194 aaPredicted RBP3.96□□□□□ -1.78
VAM3YOR106W FRE4P53746 719 aa3.96□□□□□ -1.78
VAM3YOR106W YLR152CP54072 576 aa3.96□□□□□ -1.78
VAM3YOR106W PEX25Q02969 394 aa3.96□□□□□ -1.78
VAM3YOR106W YMR181CQ03231 154 aa3.96□□□□□ -1.78
VAM3YOR106W ARG4P04076 463 aaPredicted RBP3.95□□□□□ -1.78
VAM3YOR106W ESL1P40456 1118 aa3.95□□□□□ -1.78
VAM3YOR106W HXT11P54862 567 aa3.95□□□□□ -1.78
VAM3YOR106W VTA1Q06263 330 aa3.95□□□□□ -1.78
VAM3YOR106W SGT1Q08446 395 aa3.95□□□□□ -1.78
VAM3YOR106W GRX6Q12438 231 aa3.95□□□□□ -1.78
VAM3YOR106W MET17P06106 444 aa3.94□□□□□ -1.78
VAM3YOR106W SLY1P22213 666 aa3.94□□□□□ -1.78
VAM3YOR106W HXT3P32466 567 aaKnown RBP3.94□□□□□ -1.78
VAM3YOR106W LYS1P38998 373 aaRIP-Chip data3.94□□□□□ -1.78 RIP-Chip
VAM3YOR106W IRC6P43615 237 aa3.94□□□□□ -1.78
VAM3YOR106W SHY1P53266 389 aa3.94□□□□□ -1.78
VAM3YOR106W YNR048WP53740 393 aa3.94□□□□□ -1.78
VAM3YOR106W CWC25P53854 179 aaKnown RBP3.94□□□□□ -1.78
VAM3YOR106W YMR027WQ04371 470 aa3.94□□□□□ -1.78
VAM3YOR106W REX4Q08237 289 aa3.94□□□□□ -1.78
VAM3YOR106W SNX3Q08826 162 aaKnown RBP3.94□□□□□ -1.78
VAM3YOR106W TEF1P02994 458 aaKnown RBP3.93□□□□□ -1.78
VAM3YOR106W RIP1P08067 215 aa3.93□□□□□ -1.78
VAM3YOR106W CKA1P15790 372 aa3.93□□□□□ -1.78
VAM3YOR106W MSG5P38590 489 aa3.93□□□□□ -1.78
VAM3YOR106W WTM1Q12363 437 aaKnown RBP3.93□□□□□ -1.78
VAM3YOR106W TRP1P00912 224 aa3.92□□□□□ -1.78
VAM3YOR106W ROX1P25042 368 aa3.92□□□□□ -1.78
VAM3YOR106W ITR1P30605 584 aa3.92□□□□□ -1.78
VAM3YOR106W MUD1P32605 298 aaKnown RBP3.92□□□□□ -1.78
VAM3YOR106W KKQ8P36004 724 aa3.92□□□□□ -1.78
VAM3YOR106W ARA1P38115 344 aa3.92□□□□□ -1.78
VAM3YOR106W SAS2P40963 338 aa3.92□□□□□ -1.78
VAM3YOR106W MRPL19P53875 158 aa3.92□□□□□ -1.78
VAM3YOR106W RPS8AP0CX39 200 aaKnown RBP3.91□□□□□ -1.78
VAM3YOR106W RPS8BP0CX40 200 aaKnown RBP3.91□□□□□ -1.78
VAM3YOR106W PRS1P32895 427 aaKnown RBP3.91□□□□□ -1.78
VAM3YOR106W HCS1P34243 683 aa3.91□□□□□ -1.78
VAM3YOR106W HMS2P47175 358 aa3.91□□□□□ -1.78
VAM3YOR106W FMS1P50264 508 aa3.91□□□□□ -1.78
VAM3YOR106W RSN1Q03516 953 aa3.91□□□□□ -1.78
VAM3YOR106W SIL1Q08199 421 aa3.91□□□□□ -1.78
VAM3YOR106W LSB5P25369 354 aa3.9□□□□□ -1.79
VAM3YOR106W DLD2P46681 530 aaKnown RBP3.9□□□□□ -1.79
VAM3YOR106W MTM1P53320 366 aa3.9□□□□□ -1.79
VAM3YOR106W TSR2Q06672 205 aaKnown RBP3.9□□□□□ -1.79
VAM3YOR106W BUD21Q08492 214 aaPredicted RBP3.9□□□□□ -1.79
VAM3YOR106W SOD1P00445 154 aaKnown RBP3.89□□□□□ -1.79
VAM3YOR106W SNT1P25357 1226 aa3.89□□□□□ -1.79
VAM3YOR106W YBR137WP38276 179 aa3.89□□□□□ -1.79
VAM3YOR106W YJR011CP47086 261 aaPredicted RBP3.89□□□□□ -1.79
VAM3YOR106W BET5Q03630 159 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms