RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeast

Gene VPS21, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS21	YOR089C	YNK1	P36010	153 aa	Known RBP	4.18	□□□□□ -1.74
VPS21	YOR089C	UIP5	P36137	443 aa		4.18	□□□□□ -1.74
VPS21	YOR089C	HXT9	P40885	567 aa		4.18	□□□□□ -1.74
VPS21	YOR089C	RPS0B	P46654	252 aa	Known RBP	4.18	□□□□□ -1.74
VPS21	YOR089C	COP1	P53622	1201 aa	Known RBP	4.18	□□□□□ -1.74
VPS21	YOR089C	YNL181W	P53878	407 aa		4.18	□□□□□ -1.74
VPS21	YOR089C	SEC5	P89102	971 aa		4.18	□□□□□ -1.74
VPS21	YOR089C	RHO4	Q00246	291 aa		4.18	□□□□□ -1.74
VPS21	YOR089C	YDR341C	Q05506	607 aa	Known RBP	4.18	□□□□□ -1.74
VPS21	YOR089C	GLO2	Q05584	274 aa		4.18	□□□□□ -1.74
VPS21	YOR089C	DIS3	Q08162	1001 aa	Known RBP	4.18	□□□□□ -1.74
VPS21	YOR089C	HIF1	Q12373	385 aa		4.18	□□□□□ -1.74
VPS21	YOR089C	ADE6	P38972	1358 aa	Known RBP	4.17	□□□□□ -1.74
VPS21	YOR089C	AUS1	Q08409	1394 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	PGK1	P00560	416 aa	Known RBP	4.17	□□□□□ -1.74
VPS21	YOR089C	LEU4	P06208	619 aa	Known RBP	4.17	□□□□□ -1.74
VPS21	YOR089C	RAD52	P06778	471 aa	Known RBP	4.17	□□□□□ -1.74
VPS21	YOR089C	YMR085W	P0CF18	432 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	ATP10	P18496	279 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	GID7	P25569	745 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	SMI1	P32566	505 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	MSN2	P33748	704 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	RRP3	P38712	501 aa	Known RBP	4.17	□□□□□ -1.74
VPS21	YOR089C	VHS2	P40463	436 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	TFG2	P41896	400 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS21	YOR089C	YPT11	P48559	417 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	TOM22	P49334	152 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	DSL1	P53847	754 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	YPL014W	Q02606	381 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	PRP42	Q03776	544 aa	Known RBP	4.17	□□□□□ -1.74
VPS21	YOR089C	BUG1	Q12191	341 aa		4.17	□□□□□ -1.74
VPS21	YOR089C	CYB2	P00175	591 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	MDM10	P18409	493 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	EXO70	P19658	623 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	HNM1	P19807	563 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	RHB1	P25378	209 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	BEM1	P29366	551 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	UTR4	P32626	227 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	YPK3	P38070	525 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	OLA1	P38219	394 aa	Known RBP	4.16	□□□□□ -1.74
VPS21	YOR089C	ZTA1	P38230	334 aa	Known RBP	4.16	□□□□□ -1.74
VPS21	YOR089C	EFM2	P38347	419 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	EPL1	P43572	832 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	PKP2	P53170	491 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	TOF1	P53840	1238 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	RSC9	Q03124	581 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	RPN9	Q04062	393 aa	Known RBP	4.16	□□□□□ -1.74
VPS21	YOR089C	HSP31	Q04432	237 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	YLR456W	Q06199	204 aa		4.16	□□□□□ -1.74
VPS21	YOR089C	RKM1	Q08961	583 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS21	YOR089C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS21	YOR089C	SNF2	P22082	1703 aa		4.15	□□□□□ -1.74
VPS21	YOR089C	PMR1	P13586	950 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	FUN19	P28003	413 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS21	YOR089C	SIN4	P32259	974 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	PRP21	P32524	280 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS21	YOR089C	PHD1	P36093	366 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	YTA12	P40341	825 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	YIL024C	P40543	189 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	FET5	P43561	622 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	GPI1	P53306	609 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	BUD32	P53323	261 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	RHO5	P53879	331 aa	Known RBP	4.15	□□□□□ -1.75
VPS21	YOR089C	NUP100	Q02629	959 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	SEG1	Q04279	960 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	IVY1	Q04934	453 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	RUP1	Q12242	671 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	CRC1	Q12289	327 aa		4.15	□□□□□ -1.75
VPS21	YOR089C	YPR089W	O13585	888 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	SUC2	P00724	532 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	CAR1	P00812	333 aa	Known RBP	4.14	□□□□□ -1.75
VPS21	YOR089C	SCEI	P03882	235 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	RPP0	P05317	312 aa	Known RBP	4.14	□□□□□ -1.75
VPS21	YOR089C	BAR1	P12630	587 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	MBR1	P23493	339 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	YCR007C	P25354	239 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	RIM1	P32445	135 aa	Known RBP	4.14	□□□□□ -1.75
VPS21	YOR089C	MIC60	P36112	540 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	MRPL4	P36517	319 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	ERG7	P38604	731 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	FAD1	P38913	306 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	SER3	P40054	469 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	CSM2	P40465	213 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	FYV8	P46949	817 aa	Known RBP	4.14	□□□□□ -1.75
VPS21	YOR089C	YJR011C	P47086	261 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS21	YOR089C	ECM27	P47144	725 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	RRP46	P53256	223 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS21	YOR089C	ADA2	Q02336	434 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	YFH1	Q07540	174 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	ATX2	Q12067	313 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	LSP1	Q12230	341 aa	Known RBP	4.14	□□□□□ -1.75
VPS21	YOR089C	FRE7	Q12333	620 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	NBL1	Q3E7Y6	73 aa		4.14	□□□□□ -1.75
VPS21	YOR089C	MES1	P00958	751 aa	Known RBP	4.13	□□□□□ -1.75
VPS21	YOR089C	GAL4	P04386	881 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	GLK1	P17709	500 aa	Known RBP	4.13	□□□□□ -1.75
VPS21	YOR089C	YAP1	P19880	650 aa	Known RBP	4.13	□□□□□ -1.75
VPS21	YOR089C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
VPS21	YOR089C	ATP11	P32453	318 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	YEL043W	P32618	956 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms