RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W YPL109CQ02981 657 aa10.02□□□□□ -0.81
PRE6YOL038W OMS1Q06668 471 aa10.02□□□□□ -0.81
PRE6YOL038W NMD4Q12129 218 aa10.02□□□□□ -0.81
PRE6YOL038W SPE4Q12455 300 aa10.02□□□□□ -0.81
PRE6YOL038W YKL068W-AQ3E826 78 aa10.02□□□□□ -0.81
PRE6YOL038W UTP20P35194 2493 aaKnown RBP10.01□□□□□ -0.81
PRE6YOL038W CDC39P25655 2108 aaKnown RBP10.01□□□□□ -0.81
PRE6YOL038W RPS17AP02407 136 aaKnown RBP10.01□□□□□ -0.81
PRE6YOL038W KAR1P11927 433 aa10.01□□□□□ -0.81
PRE6YOL038W GCD2P12754 651 aaPredicted RBP10.01□□□□□ -0.81
PRE6YOL038W RPS17BP14127 136 aaKnown RBP10.01□□□□□ -0.81
PRE6YOL038W YJU2P28320 278 aaPredicted RBP10.01□□□□□ -0.81
PRE6YOL038W COX13P32799 129 aa10.01□□□□□ -0.81
PRE6YOL038W HES1P35843 434 aa10.01□□□□□ -0.81
PRE6YOL038W YBR139WP38109 508 aa10.01□□□□□ -0.81
PRE6YOL038W TED1P40533 473 aa10.01□□□□□ -0.81
PRE6YOL038W CUP9P41817 306 aa10.01□□□□□ -0.81
PRE6YOL038W MAL11P53048 616 aa10.01□□□□□ -0.81
PRE6YOL038W YGR053CP53234 283 aa10.01□□□□□ -0.81
PRE6YOL038W RQC1Q05468 723 aaKnown RBP10.01□□□□□ -0.81
PRE6YOL038W Q0010Q9ZZX9 128 aa10.01□□□□□ -0.81
PRE6YOL038W RPL7AP05737 244 aaKnown RBP10□□□□□ -0.81
PRE6YOL038W MSS116P15424 664 aaKnown RBP10□□□□□ -0.81
PRE6YOL038W SRV2P17555 526 aaKnown RBP10□□□□□ -0.81
PRE6YOL038W OAR1P35731 278 aa10□□□□□ -0.81
PRE6YOL038W ARB1P40024 610 aaKnown RBP10□□□□□ -0.81
PRE6YOL038W UPF3P48412 387 aaKnown RBP10□□□□□ -0.81
PRE6YOL038W YNL140CP53910 189 aa10□□□□□ -0.81
PRE6YOL038W SNP1Q00916 300 aaPredicted RBP10□□□□□ -0.81
PRE6YOL038W NUP53Q03790 475 aa10□□□□□ -0.81
PRE6YOL038W TVP15Q03860 143 aa10□□□□□ -0.81
PRE6YOL038W RPL7BQ12213 244 aaKnown RBP10□□□□□ -0.81
PRE6YOL038W NSI1Q12457 570 aa10□□□□□ -0.81
PRE6YOL038W TRP3P00937 484 aa9.99□□□□□ -0.81
PRE6YOL038W ALG7P07286 448 aa9.99□□□□□ -0.81
PRE6YOL038W GLK1P17709 500 aaKnown RBP9.99□□□□□ -0.81
PRE6YOL038W SLY41P22215 453 aa9.99□□□□□ -0.81
PRE6YOL038W SLM5P25345 492 aaKnown RBP9.99□□□□□ -0.81
PRE6YOL038W KIP2P28743 706 aa9.99□□□□□ -0.81
PRE6YOL038W PTR2P32901 601 aa9.99□□□□□ -0.81
PRE6YOL038W MOH1P38191 138 aa9.99□□□□□ -0.81
PRE6YOL038W ICE2P40499 491 aa9.99□□□□□ -0.81
PRE6YOL038W VNX1P42839 908 aa9.99□□□□□ -0.81
PRE6YOL038W SNO3P43544 222 aa9.99□□□□□ -0.81
PRE6YOL038W MUP1P50276 574 aa9.99□□□□□ -0.81
PRE6YOL038W SWF1Q04629 336 aa9.99□□□□□ -0.81
PRE6YOL038W FAR8Q05040 523 aa9.99□□□□□ -0.81
PRE6YOL038W YPR174CQ06616 221 aaPredicted RBP9.99□□□□□ -0.81
PRE6YOL038W SLF1Q12034 447 aaKnown RBP9.99□□□□□ -0.81
PRE6YOL038W ARD1P07347 238 aaPredicted RBP9.98□□□□□ -0.81
PRE6YOL038W STE14P32584 239 aa9.98□□□□□ -0.81
PRE6YOL038W AUR1P36107 401 aaPredicted RBP9.98□□□□□ -0.81
PRE6YOL038W VPS73P53142 486 aaKnown RBP9.98□□□□□ -0.81
PRE6YOL038W YDR124WQ04608 324 aa9.98□□□□□ -0.81
PRE6YOL038W YCR102CP25608 368 aa9.97□□□□□ -0.81
PRE6YOL038W YCR051WP25631 222 aa9.97□□□□□ -0.81
PRE6YOL038W MNN2P38069 597 aa9.97□□□□□ -0.81
PRE6YOL038W AIM22P47051 409 aa9.97□□□□□ -0.81
PRE6YOL038W SPT20P50875 604 aa9.97□□□□□ -0.81
PRE6YOL038W YMR210WQ03649 449 aa9.97□□□□□ -0.81
PRE6YOL038W GLO2Q05584 274 aa9.97□□□□□ -0.81
PRE6YOL038W PUS7Q08647 676 aaKnown RBP9.97□□□□□ -0.81
PRE6YOL038W YOR376WQ08900 122 aa9.97□□□□□ -0.81
PRE6YOL038W YLL054CQ12244 843 aa9.97□□□□□ -0.81
PRE6YOL038W SYP1P25623 870 aaKnown RBP9.96□□□□□ -0.82
PRE6YOL038W ARE1P25628 610 aa9.96□□□□□ -0.82
PRE6YOL038W SPO23P33757 523 aa9.96□□□□□ -0.82
PRE6YOL038W SHU2P38957 223 aa9.96□□□□□ -0.82
PRE6YOL038W SEC24P40482 926 aaKnown RBP9.96□□□□□ -0.82
PRE6YOL038W FMP32P43557 207 aa9.96□□□□□ -0.82
PRE6YOL038W ARC1P46672 376 aaKnown RBP9.96□□□□□ -0.82
PRE6YOL038W NOP19P53317 196 aaPredicted RBP9.96□□□□□ -0.82
PRE6YOL038W ISR1Q06098 443 aaKnown RBP9.96□□□□□ -0.82
PRE6YOL038W ESA1Q08649 445 aa9.96□□□□□ -0.82
PRE6YOL038W NCA2Q12374 616 aa9.96□□□□□ -0.82
PRE6YOL038W APN1P22936 367 aa9.95□□□□□ -0.82
PRE6YOL038W DCG1P32460 244 aa9.95□□□□□ -0.82
PRE6YOL038W YCR087C-AP37263 153 aa9.95□□□□□ -0.82
PRE6YOL038W OM14P38325 134 aa9.95□□□□□ -0.82
PRE6YOL038W FRT2P39734 528 aa9.95□□□□□ -0.82
PRE6YOL038W GIP2P40036 548 aa9.95□□□□□ -0.82
PRE6YOL038W SCS2P40075 244 aaKnown RBP9.95□□□□□ -0.82
PRE6YOL038W YJR115WP47152 169 aa9.95□□□□□ -0.82
PRE6YOL038W CDH1P53197 566 aa9.95□□□□□ -0.82
PRE6YOL038W YDR209CQ03480 137 aa9.95□□□□□ -0.82
PRE6YOL038W YPR109WQ06104 294 aa9.95□□□□□ -0.82
PRE6YOL038W MCH5Q08777 521 aa9.95□□□□□ -0.82
PRE6YOL038W HUA2Q12134 243 aa9.95□□□□□ -0.82
PRE6YOL038W NAR1P23503 491 aaKnown RBP9.94□□□□□ -0.82
PRE6YOL038W PTC1P35182 281 aa9.94□□□□□ -0.82
PRE6YOL038W DOA1P36037 715 aa9.94□□□□□ -0.82
PRE6YOL038W VPS52P39904 641 aa9.94□□□□□ -0.82
PRE6YOL038W YGR067CP53243 804 aa9.94□□□□□ -0.82
PRE6YOL038W SRP1Q02821 542 aaKnown RBP9.94□□□□□ -0.82
PRE6YOL038W ATG21Q02887 496 aa9.94□□□□□ -0.82
PRE6YOL038W FDC1Q03034 503 aa9.94□□□□□ -0.82
PRE6YOL038W YEH2Q07950 538 aa9.94□□□□□ -0.82
PRE6YOL038W NOB1Q08444 459 aaKnown RBP9.94□□□□□ -0.82
PRE6YOL038W NOT5Q12514 560 aaPredicted RBP9.94□□□□□ -0.82
PRE6YOL038W SSH4P32343 579 aa9.93□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms