RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	YLR283W	Q05867	314 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	EMG1	Q06287	252 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	PSR2	Q07949	397 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	NBA1	Q08229	501 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	SAM4	Q08985	325 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	APC9	Q12107	265 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	AGC1	Q12482	902 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	ECM3	Q99252	613 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	BI2	P03873	423 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	TPK3	P05986	398 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	CAF20	P12962	161 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	MTF1	P14908	341 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	RNR1	P21524	888 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	ADP1	P25371	1049 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	BEM1	P29366	551 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	DAL1	P32375	460 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	GCD11	P32481	527 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	UGP1	P32861	499 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	SHG1	P38337	142 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	EGD2	P38879	174 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	TGL3	P40308	642 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	ARC1	P46672	376 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	SNG1	P46950	547 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	TPP1	Q03796	238 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	ADY4	Q05955	493 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	UTP21	Q06078	939 aa	Predicted RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	YLR455W	Q06188	304 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	TFC6	Q06339	672 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	OPT2	Q06593	877 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	HOS1	Q12214	470 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	TMA7	Q3E764	64 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	YRF1-2	P40105	1681 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	REP2	P03872	296 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	COS2	P0CX12	379 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	COS3	P0CX13	379 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	SNF3	P10870	884 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	IMG1	P25626	169 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	LAC1	P28496	418 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	ARO7	P32178	256 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	APE2	P32454	952 aa	Known RBP	6.94	□□□□□ -1.3
MSB3	YNL293W	ISC10	P32645	267 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	FRE1	P32791	686 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	ECT1	P33412	323 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	KTR3	P38130	404 aa	Predicted RBP	6.94	□□□□□ -1.3
MSB3	YNL293W	IST2	P38250	946 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	UIP3	P39547	235 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	PTI1	P39927	425 aa	Predicted RBP	6.94	□□□□□ -1.3
MSB3	YNL293W	SLS1	P42900	643 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	AIM23	P47015	356 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	YJR107W	P47145	328 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	ASK10	P48361	1146 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	GET1	P53192	235 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	YNR065C	P53751	1116 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	BUD3	P25558	1636 aa		6.94	□□□□□ -1.3
MSB3	YNL293W	MOD5	P07884	428 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	DEG1	P31115	442 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	SSH4	P32343	579 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	ATP11	P32453	318 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	NGG1	P32494	702 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	MSN4	P33749	630 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	YNK1	P36010	153 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	IPL1	P38991	367 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	YEL025C	P39991	1188 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	YEN1	P40028	759 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	PMT4	P46971	762 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	IRC8	P47046	822 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	SMA2	Q04658	369 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	TMA10	Q06177	86 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	CSC1	Q06538	782 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	RRP40	Q08285	240 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	OXR1	Q08952	273 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	SLF1	Q12034	447 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	Q0144	Q9ZZW2	109 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	CDC6	P09119	513 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	FBA1	P14540	359 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	RFA1	P22336	621 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	ATP7	P30902	174 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	PGM1	P33401	570 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	SHM2	P37291	469 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	PFA3	P42836	336 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	AGP3	P43548	558 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	ADO1	P47143	340 aa	Known RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	ECM27	P47144	725 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	BIO3	P50277	480 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	POP6	P53218	158 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	SHY1	P53266	389 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	YPL108W	Q02872	168 aa	Predicted RBP	6.93	□□□□□ -1.3
MSB3	YNL293W	YPL107W	Q02873	248 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	YET2	Q04210	160 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	YLR053C	Q12026	108 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	TY1A-DR3	Q12441	440 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	RRD2	Q12461	358 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	PCD1	Q12524	340 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	AFI1	Q99222	893 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	YOR019W	Q99248	730 aa		6.93	□□□□□ -1.3
MSB3	YNL293W	YUR1	P26725	428 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	AVT5	P38176	459 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	TCM62	P38228	572 aa	Known RBP	6.92	□□□□□ -1.3
MSB3	YNL293W	FHL1	P39521	936 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	YEL020C	P39994	560 aa		6.92	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms