RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C YPL272CQ08984 517 aa0.49□□□□□ -2.33
NIP1YMR309C YPR022CQ12139 1133 aa0.49□□□□□ -2.33
NIP1YMR309C RAD61Q99359 647 aa0.49□□□□□ -2.33
NIP1YMR309C TEF1P02994 458 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C ARG4P04076 463 aaPredicted RBP0.48□□□□□ -2.33
NIP1YMR309C RHO2P06781 192 aa0.48□□□□□ -2.33
NIP1YMR309C DFR1P07807 211 aaKnown RBP RIP-Chip data0.48□□□□□ -2.33not detected
NIP1YMR309C NFT1P0CE68 1218 aa0.48□□□□□ -2.33
NIP1YMR309C RPS8AP0CX39 200 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C RPS8BP0CX40 200 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C SPO7P18410 259 aa0.48□□□□□ -2.33
NIP1YMR309C ATP10P18496 279 aa0.48□□□□□ -2.33
NIP1YMR309C CLN1P20437 546 aa0.48□□□□□ -2.33
NIP1YMR309C PRD1P25375 712 aa0.48□□□□□ -2.33
NIP1YMR309C RAD14P28519 371 aa0.48□□□□□ -2.33
NIP1YMR309C NUP2P32499 720 aa0.48□□□□□ -2.33
NIP1YMR309C CHK1P38147 527 aa0.48□□□□□ -2.33
NIP1YMR309C BMT2P38278 337 aa0.48□□□□□ -2.33
NIP1YMR309C CCT6P39079 546 aa0.48□□□□□ -2.33
NIP1YMR309C TIM17P39515 158 aa0.48□□□□□ -2.33
NIP1YMR309C AIM10P39965 576 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C IES5P40060 125 aa0.48□□□□□ -2.33
NIP1YMR309C YGR149WP48236 432 aa0.48□□□□□ -2.33
NIP1YMR309C YGL108CP53139 140 aa0.48□□□□□ -2.33
NIP1YMR309C MKC7P53379 596 aa0.48□□□□□ -2.33
NIP1YMR309C MEP3P53390 489 aa0.48□□□□□ -2.33
NIP1YMR309C HXT11P54862 567 aa0.48□□□□□ -2.33
NIP1YMR309C BET5Q03630 159 aa0.48□□□□□ -2.33
NIP1YMR309C ECM11Q04110 302 aa0.48□□□□□ -2.33
NIP1YMR309C IOC4Q04213 475 aa0.48□□□□□ -2.33
NIP1YMR309C YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.48□□□□□ -2.33not detected
NIP1YMR309C YPQ1Q12010 308 aa0.48□□□□□ -2.33
NIP1YMR309C YRM1Q12340 786 aa0.48□□□□□ -2.33
NIP1YMR309C YDL007C-AQ2V2Q0 85 aa0.48□□□□□ -2.33
NIP1YMR309C YLR278CQ05854 1341 aa0.48□□□□□ -2.33
NIP1YMR309C HIS4P00815 799 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C SRV2P17555 526 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C TRX2P22803 104 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C MCM10P32354 571 aa0.48□□□□□ -2.33
NIP1YMR309C ECM25P32525 599 aa0.48□□□□□ -2.33
NIP1YMR309C NOP4P37838 685 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C MRPS9P38120 278 aa0.48□□□□□ -2.33
NIP1YMR309C THI2P38141 450 aa0.48□□□□□ -2.33
NIP1YMR309C FUI1P38196 639 aa0.48□□□□□ -2.33
NIP1YMR309C LYS1P38998 373 aaRIP-Chip data0.48□□□□□ -2.33not detected
NIP1YMR309C ESL1P40456 1118 aa0.48□□□□□ -2.33
NIP1YMR309C YIL029CP40538 142 aa0.48□□□□□ -2.33
NIP1YMR309C VTC2P43585 828 aa0.48□□□□□ -2.33
NIP1YMR309C TRS85P46944 698 aa0.48□□□□□ -2.33
NIP1YMR309C YJR085CP47131 105 aaKnown RBP0.48□□□□□ -2.33
NIP1YMR309C HMS2P47175 358 aa0.48□□□□□ -2.33
NIP1YMR309C MRX6P48564 524 aa0.48□□□□□ -2.33
NIP1YMR309C FRE4P53746 719 aa0.48□□□□□ -2.33
NIP1YMR309C ALF1P53904 254 aa0.48□□□□□ -2.33
NIP1YMR309C MTQ1P53944 314 aa0.48□□□□□ -2.33
NIP1YMR309C YMR181CQ03231 154 aa0.48□□□□□ -2.33
NIP1YMR309C RPC11Q04307 110 aaPredicted RBP0.48□□□□□ -2.33
NIP1YMR309C MFB1Q04922 465 aa0.48□□□□□ -2.33
NIP1YMR309C MCH1Q07376 486 aa0.48□□□□□ -2.33
NIP1YMR309C CTI6Q08923 506 aa0.48□□□□□ -2.33
NIP1YMR309C NMD4Q12129 218 aa0.48□□□□□ -2.33
NIP1YMR309C SPS4P09937 338 aa0.47□□□□□ -2.33
NIP1YMR309C SPB1P25582 841 aaPredicted RBP0.47□□□□□ -2.33
NIP1YMR309C CSE2P33308 149 aa0.47□□□□□ -2.33
NIP1YMR309C WBP1P33767 430 aaKnown RBP0.47□□□□□ -2.33
NIP1YMR309C ARA1P38115 344 aa0.47□□□□□ -2.33
NIP1YMR309C YHR054CP38780 354 aa0.47□□□□□ -2.33
NIP1YMR309C KEL1P38853 1164 aaKnown RBP0.47□□□□□ -2.33
NIP1YMR309C UTP18P40362 594 aaPredicted RBP0.47□□□□□ -2.33
NIP1YMR309C GAB1P41733 394 aa0.47□□□□□ -2.33
NIP1YMR309C YFR057WP43625 151 aa0.47□□□□□ -2.33
NIP1YMR309C BRO1P48582 844 aa0.47□□□□□ -2.33
NIP1YMR309C RTS3P53289 263 aa0.47□□□□□ -2.33
NIP1YMR309C MTM1P53320 366 aa0.47□□□□□ -2.33
NIP1YMR309C YPL107WQ02873 248 aa0.47□□□□□ -2.33
NIP1YMR309C GIR2Q03768 265 aaPredicted RBP0.47□□□□□ -2.33
NIP1YMR309C YPR091CQ06833 770 aa0.47□□□□□ -2.33
NIP1YMR309C NDE2Q07500 545 aa0.47□□□□□ -2.33
NIP1YMR309C IES4Q08561 116 aa0.47□□□□□ -2.33
NIP1YMR309C IZH2Q12442 317 aa0.47□□□□□ -2.33
NIP1YMR309C SEC39Q12745 709 aa0.47□□□□□ -2.33
NIP1YMR309C YBL111CQ3E7Y5 667 aa0.47□□□□□ -2.33
NIP1YMR309C GCN4P03069 281 aa0.47□□□□□ -2.33
NIP1YMR309C AAC3P18238 307 aa0.47□□□□□ -2.33
NIP1YMR309C AAT2P23542 418 aaKnown RBP0.47□□□□□ -2.33
NIP1YMR309C GFD2P25370 566 aaKnown RBP0.47□□□□□ -2.33
NIP1YMR309C GYP6P32806 458 aa0.47□□□□□ -2.33
NIP1YMR309C MRE11P32829 692 aa0.47□□□□□ -2.33
NIP1YMR309C VHC1P38329 1120 aa0.47□□□□□ -2.33
NIP1YMR309C MIG3P39943 394 aa0.47□□□□□ -2.33
NIP1YMR309C MDE1P47095 244 aa0.47□□□□□ -2.33
NIP1YMR309C BIR1P47134 954 aa0.47□□□□□ -2.33
NIP1YMR309C AZR1P50080 613 aa0.47□□□□□ -2.33
NIP1YMR309C PHB2P50085 310 aa0.47□□□□□ -2.33
NIP1YMR309C TWF1P53250 332 aa0.47□□□□□ -2.33
NIP1YMR309C CRH1P53301 507 aa0.47□□□□□ -2.33
NIP1YMR309C NUP116Q02630 1113 aa0.47□□□□□ -2.33
NIP1YMR309C HSP31Q04432 237 aa0.47□□□□□ -2.33
NIP1YMR309C SGT1Q08446 395 aa0.47□□□□□ -2.33
NIP1YMR309C SEM1O94742 89 aa0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms