RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C ATP3P38077 311 aaKnown RBP3.68□□□□□ -1.82
SSO2YMR183C DED81P38707 554 aaKnown RBP3.68□□□□□ -1.82
SSO2YMR183C ARN1P38731 627 aa3.68□□□□□ -1.82
SSO2YMR183C PEX18P38855 283 aa3.68□□□□□ -1.82
SSO2YMR183C CIN4P39110 191 aa3.68□□□□□ -1.82
SSO2YMR183C YIR016WP40572 265 aa3.68□□□□□ -1.82
SSO2YMR183C YHC3P47040 408 aa3.68□□□□□ -1.82
SSO2YMR183C EMC2P47133 292 aaKnown RBP3.68□□□□□ -1.82
SSO2YMR183C LYS20P48570 428 aaKnown RBP3.68□□□□□ -1.82
SSO2YMR183C YGL108CP53139 140 aa3.68□□□□□ -1.82
SSO2YMR183C INP2Q03824 705 aa3.68□□□□□ -1.82
SSO2YMR183C CSI1Q04368 295 aa3.68□□□□□ -1.82
SSO2YMR183C RTT109Q07794 436 aa3.68□□□□□ -1.82
SSO2YMR183C YOL159CQ08300 171 aa3.68□□□□□ -1.82
SSO2YMR183C SRL1Q08673 210 aa3.68□□□□□ -1.82
SSO2YMR183C TY3A-GQ12173 290 aa3.68□□□□□ -1.82
SSO2YMR183C RRI1Q12468 440 aa3.68□□□□□ -1.82
SSO2YMR183C TY3A-IQ99219 290 aa3.68□□□□□ -1.82
SSO2YMR183C HSL1P34244 1518 aa3.67□□□□□ -1.82
SSO2YMR183C LEU4P06208 619 aaKnown RBP3.67□□□□□ -1.82
SSO2YMR183C GPH1P06738 902 aaKnown RBP3.67□□□□□ -1.82
SSO2YMR183C PUT2P07275 575 aa3.67□□□□□ -1.82
SSO2YMR183C UNG1P12887 359 aa3.67□□□□□ -1.82
SSO2YMR183C PMR1P13586 950 aa3.67□□□□□ -1.82
SSO2YMR183C CDC42P19073 191 aa3.67□□□□□ -1.82
SSO2YMR183C BEM1P29366 551 aa3.67□□□□□ -1.82
SSO2YMR183C TPO5P36029 618 aa3.67□□□□□ -1.82
SSO2YMR183C CAB3P36076 571 aa3.67□□□□□ -1.82
SSO2YMR183C ASC1P38011 319 aaKnown RBP3.67□□□□□ -1.82
SSO2YMR183C SCO2P38072 301 aa3.67□□□□□ -1.82
SSO2YMR183C TSC10P38342 320 aa3.67□□□□□ -1.82
SSO2YMR183C DBP8P38719 431 aa3.67□□□□□ -1.82
SSO2YMR183C BZZ1P38822 633 aa3.67□□□□□ -1.82
SSO2YMR183C MNL1P38888 796 aa3.67□□□□□ -1.82
SSO2YMR183C PHM8P40025 321 aa3.67□□□□□ -1.82
SSO2YMR183C CDC1P40986 491 aa3.67□□□□□ -1.82
SSO2YMR183C RPN11P43588 306 aaKnown RBP3.67□□□□□ -1.82
SSO2YMR183C AIM22P47051 409 aa3.67□□□□□ -1.82
SSO2YMR183C YGL242CP53066 181 aa3.67□□□□□ -1.82
SSO2YMR183C ROG1P53118 685 aa3.67□□□□□ -1.82
SSO2YMR183C PNC1P53184 216 aaKnown RBP3.67□□□□□ -1.82
SSO2YMR183C YDR541CQ03049 344 aa3.67□□□□□ -1.82
SSO2YMR183C ATG38Q05789 226 aaKnown RBP3.67□□□□□ -1.82
SSO2YMR183C NDL1Q06568 189 aa3.67□□□□□ -1.82
SSO2YMR183C ETT1Q08421 412 aaKnown RBP3.67□□□□□ -1.82
SSO2YMR183C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82 RIP-Chip
SSO2YMR183C YRM1Q12340 786 aa3.67□□□□□ -1.82
SSO2YMR183C SFG1Q12507 346 aa3.67□□□□□ -1.82
SSO2YMR183C SRN2Q99176 213 aa3.67□□□□□ -1.82
SSO2YMR183C ECM5Q03214 1411 aa3.67□□□□□ -1.82
SSO2YMR183C SPT6P23615 1451 aaKnown RBP3.67□□□□□ -1.82
SSO2YMR183C RAV1P47104 1357 aa3.66□□□□□ -1.82
SSO2YMR183C COR1P07256 457 aa3.66□□□□□ -1.82
SSO2YMR183C PET111P08468 800 aa3.66□□□□□ -1.82
SSO2YMR183C SAG1P20840 650 aa3.66□□□□□ -1.82
SSO2YMR183C MRPL25P23369 157 aa3.66□□□□□ -1.82
SSO2YMR183C ELO2P25358 347 aa3.66□□□□□ -1.82
SSO2YMR183C DPH5P32469 300 aaPredicted RBP3.66□□□□□ -1.82
SSO2YMR183C ECM25P32525 599 aa3.66□□□□□ -1.82
SSO2YMR183C KKQ8P36004 724 aa3.66□□□□□ -1.82
SSO2YMR183C YKT6P36015 200 aaKnown RBP3.66□□□□□ -1.82
SSO2YMR183C VHC1P38329 1120 aa3.66□□□□□ -1.82
SSO2YMR183C END3P39013 349 aa3.66□□□□□ -1.82
SSO2YMR183C YER130CP39959 443 aa3.66□□□□□ -1.82
SSO2YMR183C AIM20P40451 204 aa3.66□□□□□ -1.82
SSO2YMR183C IAH1P41734 238 aa3.66□□□□□ -1.82
SSO2YMR183C GCD14P46959 383 aaPredicted RBP3.66□□□□□ -1.82
SSO2YMR183C ATG27P46989 271 aa3.66□□□□□ -1.82
SSO2YMR183C YPT11P48559 417 aa3.66□□□□□ -1.82
SSO2YMR183C ASN2P49090 572 aaKnown RBP3.66□□□□□ -1.82
SSO2YMR183C YPR003CP53394 754 aa3.66□□□□□ -1.82
SSO2YMR183C EKI1Q03764 534 aa3.66□□□□□ -1.82
SSO2YMR183C ATC1Q04005 294 aa3.66□□□□□ -1.82
SSO2YMR183C SMA2Q04658 369 aa3.66□□□□□ -1.82
SSO2YMR183C ECM30Q06673 1274 aa3.66□□□□□ -1.82
SSO2YMR183C SNA4Q07549 140 aa3.66□□□□□ -1.82
SSO2YMR183C LDB17Q12342 491 aa3.66□□□□□ -1.82
SSO2YMR183C RHO2P06781 192 aa3.65□□□□□ -1.83
SSO2YMR183C RNR2P09938 399 aaKnown RBP3.65□□□□□ -1.83
SSO2YMR183C GAL3P13045 520 aa3.65□□□□□ -1.83
SSO2YMR183C RPB4P20433 221 aaPredicted RBP3.65□□□□□ -1.83
SSO2YMR183C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
SSO2YMR183C PTK1P36002 662 aaPredicted RBP3.65□□□□□ -1.83
SSO2YMR183C YBR139WP38109 508 aa3.65□□□□□ -1.83
SSO2YMR183C OLA1P38219 394 aaKnown RBP3.65□□□□□ -1.83
SSO2YMR183C YMR147WP40218 223 aaKnown RBP3.65□□□□□ -1.83
SSO2YMR183C LOC1P43586 204 aaPredicted RBP3.65□□□□□ -1.83
SSO2YMR183C BRO1P48582 844 aa3.65□□□□□ -1.83
SSO2YMR183C YGL114WP53134 725 aa3.65□□□□□ -1.83
SSO2YMR183C PIB2P53191 635 aa3.65□□□□□ -1.83
SSO2YMR183C ERG26P53199 349 aaKnown RBP3.65□□□□□ -1.83
SSO2YMR183C HEF3P53978 1044 aaKnown RBP3.65□□□□□ -1.83
SSO2YMR183C MSC1Q03104 513 aa3.65□□□□□ -1.83
SSO2YMR183C EMI2Q04409 500 aaKnown RBP3.65□□□□□ -1.83
SSO2YMR183C PDR8Q06149 701 aa3.65□□□□□ -1.83
SSO2YMR183C YLR455WQ06188 304 aa3.65□□□□□ -1.83
SSO2YMR183C CLP1Q08685 445 aaPredicted RBP3.65□□□□□ -1.83
SSO2YMR183C RRD2Q12461 358 aa3.65□□□□□ -1.83
SSO2YMR183C MSS116P15424 664 aaKnown RBP3.64□□□□□ -1.83
SSO2YMR183C ALG1P16661 449 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms