RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C MNS1P32906 549 aa2.59□□□□□ -1.99
UBX4YMR067C YEL057CP39983 233 aa2.59□□□□□ -1.99
UBX4YMR067C VID27P40157 782 aa2.59□□□□□ -1.99
UBX4YMR067C DOT5P40553 215 aa2.59□□□□□ -1.99
UBX4YMR067C VTC2P43585 828 aa2.59□□□□□ -1.99
UBX4YMR067C ECM27P47144 725 aa2.59□□□□□ -1.99
UBX4YMR067C YGR149WP48236 432 aa2.59□□□□□ -1.99
UBX4YMR067C GIR2Q03768 265 aaPredicted RBP2.59□□□□□ -1.99
UBX4YMR067C TSA2Q04120 196 aa2.59□□□□□ -1.99
UBX4YMR067C SGT1Q08446 395 aa2.59□□□□□ -1.99
UBX4YMR067C IMP2'P32351 346 aa2.58□□□□□ -2
UBX4YMR067C THI2P38141 450 aa2.58□□□□□ -2
UBX4YMR067C SLX1P38324 304 aa2.58□□□□□ -2
UBX4YMR067C CCT2P39076 527 aaKnown RBP2.58□□□□□ -2
UBX4YMR067C PCP1P53259 346 aa2.58□□□□□ -2
UBX4YMR067C ARE2P53629 642 aaKnown RBP2.58□□□□□ -2
UBX4YMR067C YNR048WP53740 393 aa2.58□□□□□ -2
UBX4YMR067C CWC25P53854 179 aaKnown RBP2.58□□□□□ -2
UBX4YMR067C PPM1Q04081 328 aa2.58□□□□□ -2
UBX4YMR067C HSP31Q04432 237 aa2.58□□□□□ -2
UBX4YMR067C IMH1Q06704 911 aaKnown RBP2.58□□□□□ -2
UBX4YMR067C YML133CQ03099 1374 aa2.58□□□□□ -2
UBX4YMR067C YLL067CQ07888 1374 aa2.58□□□□□ -2
UBX4YMR067C YLL066CQ99208 1374 aa2.58□□□□□ -2
UBX4YMR067C TOP1P04786 769 aa2.57□□□□□ -2
UBX4YMR067C SPS4P09937 338 aa2.57□□□□□ -2
UBX4YMR067C PRP21P32524 280 aaPredicted RBP2.57□□□□□ -2
UBX4YMR067C NIP100P33420 868 aa2.57□□□□□ -2
UBX4YMR067C HCS1P34243 683 aa2.57□□□□□ -2
UBX4YMR067C VID24P38263 362 aa2.57□□□□□ -2
UBX4YMR067C HXT14P42833 540 aa2.57□□□□□ -2
UBX4YMR067C HXT11P54862 567 aa2.57□□□□□ -2
UBX4YMR067C HAL1Q01766 294 aa2.57□□□□□ -2
UBX4YMR067C RQC1Q05468 723 aaKnown RBP2.57□□□□□ -2
UBX4YMR067C IRC25Q07951 179 aa2.57□□□□□ -2
UBX4YMR067C YPR022CQ12139 1133 aa2.57□□□□□ -2
UBX4YMR067C YLR278CQ05854 1341 aa2.57□□□□□ -2
UBX4YMR067C TRP1P00912 224 aa2.56□□□□□ -2
UBX4YMR067C ARG4P04076 463 aaPredicted RBP2.56□□□□□ -2
UBX4YMR067C RPS8AP0CX39 200 aaKnown RBP2.56□□□□□ -2
UBX4YMR067C RPS8BP0CX40 200 aaKnown RBP2.56□□□□□ -2
UBX4YMR067C POP5P28005 173 aa2.56□□□□□ -2
UBX4YMR067C APE2P32454 952 aaKnown RBP2.56□□□□□ -2
UBX4YMR067C KKQ8P36004 724 aa2.56□□□□□ -2
UBX4YMR067C MRP21P38175 177 aa2.56□□□□□ -2
UBX4YMR067C UTP9P38882 575 aaKnown RBP2.56□□□□□ -2
UBX4YMR067C VMA13P41807 478 aaKnown RBP2.56□□□□□ -2
UBX4YMR067C MTM1P53320 366 aa2.56□□□□□ -2
UBX4YMR067C RPT6Q01939 405 aaKnown RBP2.56□□□□□ -2
UBX4YMR067C YDR387CQ04162 555 aa2.56□□□□□ -2
UBX4YMR067C TEF1P02994 458 aaKnown RBP2.55□□□□□ -2
UBX4YMR067C GPH1P06738 902 aaKnown RBP2.55□□□□□ -2
UBX4YMR067C NFT1P0CE68 1218 aa2.55□□□□□ -2
UBX4YMR067C MET8P15807 274 aa2.55□□□□□ -2
UBX4YMR067C KAR9P32526 644 aa2.55□□□□□ -2
UBX4YMR067C MUD1P32605 298 aaKnown RBP2.55□□□□□ -2
UBX4YMR067C MID2P36027 376 aa2.55□□□□□ -2
UBX4YMR067C YHR054CP38780 354 aa2.55□□□□□ -2
UBX4YMR067C MET18P40469 1032 aa2.55□□□□□ -2
UBX4YMR067C SPO22P40511 975 aa2.55□□□□□ -2
UBX4YMR067C JJJ1P53863 590 aa2.55□□□□□ -2
UBX4YMR067C SNX3Q08826 162 aaKnown RBP2.55□□□□□ -2
UBX4YMR067C HSP26P15992 214 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
UBX4YMR067C SLY1P22213 666 aa2.54□□□□□ -2
UBX4YMR067C PCL1P24867 279 aa2.54□□□□□ -2
UBX4YMR067C GFD2P25370 566 aaKnown RBP2.54□□□□□ -2
UBX4YMR067C IDH2P28241 369 aaKnown RBP2.54□□□□□ -2
UBX4YMR067C ITR1P30605 584 aa2.54□□□□□ -2
UBX4YMR067C PMT1P33775 817 aa2.54□□□□□ -2
UBX4YMR067C UTH1P36135 365 aa2.54□□□□□ -2
UBX4YMR067C YBR137WP38276 179 aa2.54□□□□□ -2
UBX4YMR067C FRE4P53746 719 aa2.54□□□□□ -2
UBX4YMR067C RTP1Q12751 981 aa2.54□□□□□ -2
UBX4YMR067C RPI1P23250 407 aaKnown RBP2.53□□□□□ -2
UBX4YMR067C OTU2P38747 307 aaKnown RBP2.53□□□□□ -2
UBX4YMR067C LYS1P38998 373 aaRIP-Chip data2.53□□□□□ -2 RIP-Chip
UBX4YMR067C GAB1P41733 394 aa2.53□□□□□ -2
UBX4YMR067C SVL3Q03088 825 aaKnown RBP2.53□□□□□ -2
UBX4YMR067C CUE5Q08412 411 aaKnown RBP2.53□□□□□ -2
UBX4YMR067C RIM20Q12033 661 aa2.53□□□□□ -2
UBX4YMR067C RIP1P08067 215 aa2.52□□□□□ -2.01
UBX4YMR067C NUP2P32499 720 aa2.52□□□□□ -2.01
UBX4YMR067C ARF3P40994 183 aaRIP-Chip data2.52□□□□□ -2.01not detected
UBX4YMR067C KTR5P53966 522 aaPredicted RBP2.52□□□□□ -2.01
UBX4YMR067C YDL012CQ12489 107 aa2.52□□□□□ -2.01
UBX4YMR067C CYC3P06182 269 aa2.51□□□□□ -2.01
UBX4YMR067C SEC63P14906 663 aa2.51□□□□□ -2.01
UBX4YMR067C SNT1P25357 1226 aa2.51□□□□□ -2.01
UBX4YMR067C GPI10P30777 616 aa2.51□□□□□ -2.01
UBX4YMR067C VHC1P38329 1120 aa2.51□□□□□ -2.01
UBX4YMR067C PCF11P39081 626 aaPredicted RBP2.51□□□□□ -2.01
UBX4YMR067C UTP18P40362 594 aaPredicted RBP2.51□□□□□ -2.01
UBX4YMR067C ESL1P40456 1118 aa2.51□□□□□ -2.01
UBX4YMR067C BRO1P48582 844 aa2.51□□□□□ -2.01
UBX4YMR067C SYF1Q04048 859 aaPredicted RBP2.51□□□□□ -2.01
UBX4YMR067C VTA1Q06263 330 aa2.51□□□□□ -2.01
UBX4YMR067C REX4Q08237 289 aa2.51□□□□□ -2.01
UBX4YMR067C SKI7Q08491 747 aaPredicted RBP2.51□□□□□ -2.01
UBX4YMR067C RMD5Q12508 421 aa2.51□□□□□ -2.01
UBX4YMR067C MRPL10P36520 322 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms