RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C YBR139WP38109 508 aa4.67□□□□□ -1.66
PEX12YMR026C GPD2P41911 440 aaKnown RBP4.67□□□□□ -1.66
PEX12YMR026C RSC1P53236 928 aa4.67□□□□□ -1.66
PEX12YMR026C RRG1Q12167 365 aaPredicted RBP4.67□□□□□ -1.66
PEX12YMR026C SAM1P10659 382 aaKnown RBP4.66□□□□□ -1.66
PEX12YMR026C SEC63P14906 663 aa4.66□□□□□ -1.66
PEX12YMR026C FUR1P18562 216 aaKnown RBP4.66□□□□□ -1.66
PEX12YMR026C SAM2P19358 384 aaKnown RBP4.66□□□□□ -1.66
PEX12YMR026C YOX1P34161 385 aa4.66□□□□□ -1.66
PEX12YMR026C LSM5P40089 93 aaKnown RBP4.66□□□□□ -1.66
PEX12YMR026C SPG5P42933 373 aa4.66□□□□□ -1.66
PEX12YMR026C YFL067WP43537 175 aa4.66□□□□□ -1.66
PEX12YMR026C MUM3Q08750 479 aa4.66□□□□□ -1.66
PEX12YMR026C HOM3P10869 527 aa4.65□□□□□ -1.67
PEX12YMR026C APE2P32454 952 aaKnown RBP4.65□□□□□ -1.67
PEX12YMR026C SAS2P40963 338 aa4.65□□□□□ -1.67
PEX12YMR026C ECM27P47144 725 aa4.65□□□□□ -1.67
PEX12YMR026C GOR1P53839 350 aa4.65□□□□□ -1.67
PEX12YMR026C YIF1P53845 314 aaKnown RBP4.65□□□□□ -1.67
PEX12YMR026C IBD2P53892 351 aa4.65□□□□□ -1.67
PEX12YMR026C MRP51Q02950 344 aa4.65□□□□□ -1.67
PEX12YMR026C SXM1Q04175 944 aaKnown RBP4.65□□□□□ -1.67
PEX12YMR026C RRN11Q04712 507 aa4.65□□□□□ -1.67
PEX12YMR026C RPI1P23250 407 aaKnown RBP4.64□□□□□ -1.67
PEX12YMR026C SNT1P25357 1226 aa4.64□□□□□ -1.67
PEX12YMR026C ARA1P38115 344 aa4.64□□□□□ -1.67
PEX12YMR026C MIX23P38162 196 aa4.64□□□□□ -1.67
PEX12YMR026C RFC3P38629 340 aa4.64□□□□□ -1.67
PEX12YMR026C MST28P39552 234 aa4.64□□□□□ -1.67
PEX12YMR026C YIL067CP40514 678 aa4.64□□□□□ -1.67
PEX12YMR026C SSN8P47821 323 aa4.64□□□□□ -1.67
PEX12YMR026C YGL242CP53066 181 aa4.64□□□□□ -1.67
PEX12YMR026C YGR250CP53316 781 aaKnown RBP4.64□□□□□ -1.67
PEX12YMR026C ARX1Q03862 593 aaKnown RBP4.64□□□□□ -1.67
PEX12YMR026C RRP45Q05636 305 aaKnown RBP4.64□□□□□ -1.67
PEX12YMR026C ESA1Q08649 445 aa4.64□□□□□ -1.67
PEX12YMR026C YOR387CQ08910 206 aa4.64□□□□□ -1.67
PEX12YMR026C HIF1Q12373 385 aa4.64□□□□□ -1.67
PEX12YMR026C HIS4P00815 799 aaKnown RBP4.63□□□□□ -1.67
PEX12YMR026C SPT15P13393 240 aaKnown RBP4.63□□□□□ -1.67
PEX12YMR026C TIP1P27654 210 aaPredicted RBP4.63□□□□□ -1.67
PEX12YMR026C SIN4P32259 974 aa4.63□□□□□ -1.67
PEX12YMR026C BYE1P36106 594 aa4.63□□□□□ -1.67
PEX12YMR026C RPS0BP46654 252 aaKnown RBP4.63□□□□□ -1.67
PEX12YMR026C COS5P47187 383 aa4.63□□□□□ -1.67
PEX12YMR026C COS7Q07788 383 aa4.63□□□□□ -1.67
PEX12YMR026C YPR022CQ12139 1133 aa4.63□□□□□ -1.67
PEX12YMR026C ERV2Q12284 196 aa4.63□□□□□ -1.67
PEX12YMR026C VMA8P32610 256 aaKnown RBP4.62□□□□□ -1.67
PEX12YMR026C YME2P32843 850 aa4.62□□□□□ -1.67
PEX12YMR026C PXA2P34230 853 aa4.62□□□□□ -1.67
PEX12YMR026C RFS1P38234 210 aaKnown RBP4.62□□□□□ -1.67
PEX12YMR026C NTC20P38302 140 aaPredicted RBP4.62□□□□□ -1.67
PEX12YMR026C YHR054CP38780 354 aa4.62□□□□□ -1.67
PEX12YMR026C OST1P41543 476 aaKnown RBP4.62□□□□□ -1.67
PEX12YMR026C YJR011CP47086 261 aaPredicted RBP4.62□□□□□ -1.67
PEX12YMR026C YGL138CP53122 345 aa4.62□□□□□ -1.67
PEX12YMR026C ERO1Q03103 563 aa4.62□□□□□ -1.67
PEX12YMR026C PBA1Q05778 276 aa4.62□□□□□ -1.67
PEX12YMR026C TIM18Q08749 192 aa4.62□□□□□ -1.67
PEX12YMR026C PKH2Q12236 1081 aaKnown RBP4.62□□□□□ -1.67
PEX12YMR026C YLR108CQ12259 485 aa4.62□□□□□ -1.67
PEX12YMR026C HSP42Q12329 375 aa4.62□□□□□ -1.67
PEX12YMR026C RRP12Q12754 1228 aaKnown RBP4.62□□□□□ -1.67
PEX12YMR026C REC107P21651 314 aa4.61□□□□□ -1.67
PEX12YMR026C CPR4P25334 318 aa4.61□□□□□ -1.67
PEX12YMR026C YCR051WP25631 222 aa4.61□□□□□ -1.67
PEX12YMR026C KRE2P27809 442 aa4.61□□□□□ -1.67
PEX12YMR026C ITR1P30605 584 aa4.61□□□□□ -1.67
PEX12YMR026C DEG1P31115 442 aaKnown RBP4.61□□□□□ -1.67
PEX12YMR026C YBL059WP34224 193 aa4.61□□□□□ -1.67
PEX12YMR026C RIB5P38145 238 aa4.61□□□□□ -1.67
PEX12YMR026C NDT80P38830 627 aa4.61□□□□□ -1.67
PEX12YMR026C FRE4P53746 719 aa4.61□□□□□ -1.67
PEX12YMR026C ELP3Q02908 557 aaKnown RBP4.61□□□□□ -1.67
PEX12YMR026C MDM30Q05930 598 aa4.61□□□□□ -1.67
PEX12YMR026C VAM3Q12241 283 aa4.61□□□□□ -1.67
PEX12YMR026C ISN1Q99312 450 aa4.61□□□□□ -1.67
PEX12YMR026C RAD61Q99359 647 aa4.61□□□□□ -1.67
PEX12YMR026C YRF1-4O13559 1382 aa4.61□□□□□ -1.67
PEX12YMR026C HHF1P02309 103 aaKnown RBP4.6□□□□□ -1.67
PEX12YMR026C SPS22P25380 463 aa4.6□□□□□ -1.67
PEX12YMR026C GEX1P25596 615 aa4.6□□□□□ -1.67
PEX12YMR026C NAM9P27929 486 aa4.6□□□□□ -1.67
PEX12YMR026C PAD1P33751 242 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
PEX12YMR026C PEX5P35056 612 aa4.6□□□□□ -1.67
PEX12YMR026C LYS1P38998 373 aaRIP-Chip data4.6□□□□□ -1.67not detected
PEX12YMR026C LAM5P43560 674 aa4.6□□□□□ -1.67
PEX12YMR026C MEH1Q02205 184 aa4.6□□□□□ -1.67
PEX12YMR026C SRV2P17555 526 aaKnown RBP4.59□□□□□ -1.67
PEX12YMR026C RHB1P25378 209 aa4.59□□□□□ -1.67
PEX12YMR026C BEM1P29366 551 aa4.59□□□□□ -1.67
PEX12YMR026C HIR2P32480 875 aa4.59□□□□□ -1.67
PEX12YMR026C SDH3P33421 198 aa4.59□□□□□ -1.67
PEX12YMR026C SDS24P38314 527 aa4.59□□□□□ -1.67
PEX12YMR026C SSU1P41930 458 aa4.59□□□□□ -1.67
PEX12YMR026C YNR048WP53740 393 aa4.59□□□□□ -1.67
PEX12YMR026C KAP120Q02932 1032 aa4.59□□□□□ -1.67
PEX12YMR026C RKM1Q08961 583 aaPredicted RBP4.59□□□□□ -1.67
PEX12YMR026C ORT1Q12375 292 aa4.59□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms