RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W REC114P32841 428 aa2.55□□□□□ -2
BER1YLR412W VMA13P41807 478 aaKnown RBP2.55□□□□□ -2
BER1YLR412W TFG2P41896 400 aaPredicted RBP2.55□□□□□ -2
BER1YLR412W YGL039WP53183 348 aaKnown RBP2.55□□□□□ -2
BER1YLR412W JJJ1P53863 590 aa2.55□□□□□ -2
BER1YLR412W YLR152CP54072 576 aa2.55□□□□□ -2
BER1YLR412W HXT11P54862 567 aa2.55□□□□□ -2
BER1YLR412W YDR387CQ04162 555 aa2.55□□□□□ -2
BER1YLR412W YPR022CQ12139 1133 aa2.55□□□□□ -2
BER1YLR412W PKH2Q12236 1081 aaKnown RBP2.55□□□□□ -2
BER1YLR412W RAD61Q99359 647 aa2.55□□□□□ -2
BER1YLR412W RVS161P25343 265 aaKnown RBP2.54□□□□□ -2
BER1YLR412W ITR1P30605 584 aa2.54□□□□□ -2
BER1YLR412W PRP21P32524 280 aaPredicted RBP2.54□□□□□ -2
BER1YLR412W SPR1P32603 445 aa2.54□□□□□ -2
BER1YLR412W NIP100P33420 868 aa2.54□□□□□ -2
BER1YLR412W CCT2P39076 527 aaKnown RBP2.54□□□□□ -2
BER1YLR412W PAN6P40459 309 aa2.54□□□□□ -2
BER1YLR412W ARF3P40994 183 aaRIP-Chip data2.54□□□□□ -2not detected
BER1YLR412W SSN8P47821 323 aa2.54□□□□□ -2
BER1YLR412W YIF1P53845 314 aaKnown RBP2.54□□□□□ -2
BER1YLR412W TIM18Q08749 192 aa2.54□□□□□ -2
BER1YLR412W MED1Q12321 566 aa2.54□□□□□ -2
BER1YLR412W YLR278CQ05854 1341 aa2.53□□□□□ -2
BER1YLR412W SPS4P09937 338 aa2.53□□□□□ -2
BER1YLR412W RPS8AP0CX39 200 aaKnown RBP2.53□□□□□ -2
BER1YLR412W RPS8BP0CX40 200 aaKnown RBP2.53□□□□□ -2
BER1YLR412W PPH22P23595 377 aa2.53□□□□□ -2
BER1YLR412W DAL2P25335 343 aa2.53□□□□□ -2
BER1YLR412W APE2P32454 952 aaKnown RBP2.53□□□□□ -2
BER1YLR412W ECM25P32525 599 aa2.53□□□□□ -2
BER1YLR412W PPM1Q04081 328 aa2.53□□□□□ -2
BER1YLR412W HSP31Q04432 237 aa2.53□□□□□ -2
BER1YLR412W RQC1Q05468 723 aaKnown RBP2.53□□□□□ -2
BER1YLR412W YDL121CQ07541 149 aa2.53□□□□□ -2
BER1YLR412W SOD1P00445 154 aaKnown RBP2.52□□□□□ -2.01
BER1YLR412W MET17P06106 444 aa2.52□□□□□ -2.01
BER1YLR412W SLY1P22213 666 aa2.52□□□□□ -2.01
BER1YLR412W RPI1P23250 407 aaKnown RBP2.52□□□□□ -2.01
BER1YLR412W MNS1P32906 549 aa2.52□□□□□ -2.01
BER1YLR412W YBR137WP38276 179 aa2.52□□□□□ -2.01
BER1YLR412W MSG5P38590 489 aa2.52□□□□□ -2.01
BER1YLR412W VTC2P43585 828 aa2.52□□□□□ -2.01
BER1YLR412W ECM27P47144 725 aa2.52□□□□□ -2.01
BER1YLR412W FRE4P53746 719 aa2.52□□□□□ -2.01
BER1YLR412W HER2Q03557 464 aa2.52□□□□□ -2.01
BER1YLR412W RPL3P14126 387 aaKnown RBP2.51□□□□□ -2.01
BER1YLR412W HXT3P32466 567 aaKnown RBP2.51□□□□□ -2.01
BER1YLR412W VHC1P38329 1120 aa2.51□□□□□ -2.01
BER1YLR412W SAS2P40963 338 aa2.51□□□□□ -2.01
BER1YLR412W MTM1P53320 366 aa2.51□□□□□ -2.01
BER1YLR412W GIR2Q03768 265 aaPredicted RBP2.51□□□□□ -2.01
BER1YLR412W SNX3Q08826 162 aaKnown RBP2.51□□□□□ -2.01
BER1YLR412W RRI2Q12348 645 aa2.51□□□□□ -2.01
BER1YLR412W GRX6Q12438 231 aa2.51□□□□□ -2.01
BER1YLR412W HIS4P00815 799 aaKnown RBP2.5□□□□□ -2.01
BER1YLR412W TRP1P00912 224 aa2.5□□□□□ -2.01
BER1YLR412W TOP1P04786 769 aa2.5□□□□□ -2.01
BER1YLR412W GPH1P06738 902 aaKnown RBP2.5□□□□□ -2.01
BER1YLR412W SMF1P38925 575 aa2.5□□□□□ -2.01
BER1YLR412W LYS1P38998 373 aaRIP-Chip data2.5□□□□□ -2.01not detected
BER1YLR412W SHY1P53266 389 aa2.5□□□□□ -2.01
BER1YLR412W YNR048WP53740 393 aa2.5□□□□□ -2.01
BER1YLR412W CWC25P53854 179 aaKnown RBP2.5□□□□□ -2.01
BER1YLR412W PEX25Q02969 394 aa2.5□□□□□ -2.01
BER1YLR412W YMR181CQ03231 154 aa2.5□□□□□ -2.01
BER1YLR412W SYF1Q04048 859 aaPredicted RBP2.5□□□□□ -2.01
BER1YLR412W YMR027WQ04371 470 aa2.5□□□□□ -2.01
BER1YLR412W SIL1Q08199 421 aa2.5□□□□□ -2.01
BER1YLR412W WTM1Q12363 437 aaKnown RBP2.5□□□□□ -2.01
BER1YLR412W TEF1P02994 458 aaKnown RBP2.49□□□□□ -2.01
BER1YLR412W RIP1P08067 215 aa2.49□□□□□ -2.01
BER1YLR412W NFT1P0CE68 1218 aa2.49□□□□□ -2.01
BER1YLR412W MRP7P12687 371 aa2.49□□□□□ -2.01
BER1YLR412W CKA1P15790 372 aa2.49□□□□□ -2.01
BER1YLR412W PRS1P32895 427 aaKnown RBP2.49□□□□□ -2.01
BER1YLR412W OTU2P38747 307 aaKnown RBP2.49□□□□□ -2.01
BER1YLR412W ESL1P40456 1118 aa2.49□□□□□ -2.01
BER1YLR412W MDG1P53885 366 aa2.49□□□□□ -2.01
BER1YLR412W ARG4P04076 463 aaPredicted RBP2.48□□□□□ -2.01
BER1YLR412W SEC63P14906 663 aa2.48□□□□□ -2.01
BER1YLR412W ROX1P25042 368 aa2.48□□□□□ -2.01
BER1YLR412W MUD1P32605 298 aaKnown RBP2.48□□□□□ -2.01
BER1YLR412W UTH1P36135 365 aa2.48□□□□□ -2.01
BER1YLR412W YHR054CP38780 354 aa2.48□□□□□ -2.01
BER1YLR412W UTP9P38882 575 aaKnown RBP2.48□□□□□ -2.01
BER1YLR412W IRC6P43615 237 aa2.48□□□□□ -2.01
BER1YLR412W HMS2P47175 358 aa2.48□□□□□ -2.01
BER1YLR412W RSN1Q03516 953 aa2.48□□□□□ -2.01
BER1YLR412W VTA1Q06263 330 aa2.48□□□□□ -2.01
BER1YLR412W ORT1Q12375 292 aa2.48□□□□□ -2.01
BER1YLR412W CYC3P06182 269 aa2.47□□□□□ -2.01
BER1YLR412W NAT1P12945 854 aaKnown RBP2.47□□□□□ -2.01
BER1YLR412W PCL1P24867 279 aa2.47□□□□□ -2.01
BER1YLR412W KKQ8P36004 724 aa2.47□□□□□ -2.01
BER1YLR412W MRPL10P36520 322 aa2.47□□□□□ -2.01
BER1YLR412W YHR131CP38835 850 aa2.47□□□□□ -2.01
BER1YLR412W SSU1P41930 458 aa2.47□□□□□ -2.01
BER1YLR412W MNP1P53163 194 aaPredicted RBP2.47□□□□□ -2.01
BER1YLR412W MRPL19P53875 158 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms