RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C HAL9Q12180 1030 aa8.8□□□□□ -1
SEC61YLR378C GPR1Q12361 961 aa8.8□□□□□ -1
SEC61YLR378C NKP1Q12493 238 aa8.8□□□□□ -1
SEC61YLR378C COX3P00420 269 aa8.8□□□□□ -1
SEC61YLR378C KIN2P13186 1147 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C RED1P14291 827 aa8.8□□□□□ -1
SEC61YLR378C CMP2P14747 604 aa8.8□□□□□ -1
SEC61YLR378C SYP1P25623 870 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C ARP2P32381 391 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C MEI5P32489 222 aa8.8□□□□□ -1
SEC61YLR378C NUP2P32499 720 aa8.8□□□□□ -1
SEC61YLR378C TCD2P36101 447 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C DSF2P38213 736 aa8.8□□□□□ -1
SEC61YLR378C MUM2P38236 366 aa8.8□□□□□ -1
SEC61YLR378C MNT3P40549 630 aa8.8□□□□□ -1
SEC61YLR378C SSU1P41930 458 aa8.8□□□□□ -1
SEC61YLR378C RTS3P53289 263 aa8.8□□□□□ -1
SEC61YLR378C SPO19Q03029 223 aa8.8□□□□□ -1
SEC61YLR378C EAF1Q06337 982 aa8.8□□□□□ -1
SEC61YLR378C THP1Q08231 455 aa8.8□□□□□ -1
SEC61YLR378C RSA1Q08932 381 aa8.8□□□□□ -1
SEC61YLR378C SRO7Q12038 1033 aa8.8□□□□□ -1
SEC61YLR378C YOR114WQ12219 294 aa8.8□□□□□ -1
SEC61YLR378C YOL159C-AQ3E769 90 aa8.8□□□□□ -1
SEC61YLR378C HRP1Q99383 534 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C STT4P37297 1900 aa8.79□□□□□ -1
SEC61YLR378C YPR096CO13587 100 aa8.79□□□□□ -1
SEC61YLR378C APT2P36973 181 aa8.79□□□□□ -1
SEC61YLR378C RSP5P39940 809 aaKnown RBP8.79□□□□□ -1
SEC61YLR378C DCP2P53550 970 aaKnown RBP8.79□□□□□ -1
SEC61YLR378C ENT2Q05785 613 aa8.79□□□□□ -1
SEC61YLR378C RPN8Q08723 338 aaKnown RBP8.79□□□□□ -1
SEC61YLR378C RTT10Q08924 1013 aa8.79□□□□□ -1
SEC61YLR378C HTA1P04911 132 aaKnown RBP8.78□□□□□ -1
SEC61YLR378C GPH1P06738 902 aaKnown RBP8.78□□□□□ -1
SEC61YLR378C GAL3P13045 520 aa8.78□□□□□ -1
SEC61YLR378C IDH2P28241 369 aaKnown RBP8.78□□□□□ -1
SEC61YLR378C NTG1P31378 399 aa8.78□□□□□ -1
SEC61YLR378C APE2P32454 952 aaKnown RBP8.78□□□□□ -1
SEC61YLR378C PEP12P32854 288 aa8.78□□□□□ -1
SEC61YLR378C SPC42P36094 363 aa8.78□□□□□ -1
SEC61YLR378C MET30P39014 640 aa8.78□□□□□ -1
SEC61YLR378C TIF34P40217 347 aaKnown RBP8.78□□□□□ -1
SEC61YLR378C ARF3P40994 183 aaRIP-Chip data8.78□□□□□ -1not detected
SEC61YLR378C BNA3P47039 444 aaKnown RBP8.78□□□□□ -1
SEC61YLR378C ATP22P50273 684 aaPredicted RBP8.78□□□□□ -1
SEC61YLR378C BIO3P50277 480 aa8.78□□□□□ -1
SEC61YLR378C ERG26P53199 349 aaKnown RBP8.78□□□□□ -1
SEC61YLR378C CWC24P53769 259 aa8.78□□□□□ -1
SEC61YLR378C NIS1P53939 407 aa8.78□□□□□ -1
SEC61YLR378C CTK1Q03957 528 aaKnown RBP8.78□□□□□ -1
SEC61YLR378C ATG17Q06410 417 aa8.78□□□□□ -1
SEC61YLR378C LOT6Q07923 191 aa8.78□□□□□ -1
SEC61YLR378C YMR084WA2P2R3 262 aa8.77□□□□□ -1.01
SEC61YLR378C FAR1P21268 830 aa8.77□□□□□ -1.01
SEC61YLR378C GRR1P24814 1151 aa8.77□□□□□ -1.01
SEC61YLR378C POL4P25615 582 aa8.77□□□□□ -1.01
SEC61YLR378C CTS1P29029 562 aa8.77□□□□□ -1.01
SEC61YLR378C VPH2P32341 215 aa8.77□□□□□ -1.01
SEC61YLR378C SSE2P32590 693 aaKnown RBP8.77□□□□□ -1.01
SEC61YLR378C YME2P32843 850 aa8.77□□□□□ -1.01
SEC61YLR378C SSO1P32867 290 aa8.77□□□□□ -1.01
SEC61YLR378C SFC1P33303 322 aa8.77□□□□□ -1.01
SEC61YLR378C SRX1P36077 127 aa8.77□□□□□ -1.01
SEC61YLR378C PIM1P36775 1133 aa8.77□□□□□ -1.01
SEC61YLR378C ASC1P38011 319 aaKnown RBP8.77□□□□□ -1.01
SEC61YLR378C RIB1P38066 345 aa8.77□□□□□ -1.01
SEC61YLR378C TDA11P38854 504 aa8.77□□□□□ -1.01
SEC61YLR378C RGA1P39083 1007 aa8.77□□□□□ -1.01
SEC61YLR378C YAL037WP39728 267 aa8.77□□□□□ -1.01
SEC61YLR378C ZIM17P42844 174 aa8.77□□□□□ -1.01
SEC61YLR378C YNR014WP53719 212 aa8.77□□□□□ -1.01
SEC61YLR378C BNI4P53858 892 aa8.77□□□□□ -1.01
SEC61YLR378C SPR6Q01684 191 aa8.77□□□□□ -1.01
SEC61YLR378C ROY1Q04847 553 aa8.77□□□□□ -1.01
SEC61YLR378C DBP9Q06218 594 aaKnown RBP8.77□□□□□ -1.01
SEC61YLR378C PFA4Q12006 378 aa8.77□□□□□ -1.01
SEC61YLR378C WTM1Q12363 437 aaKnown RBP8.77□□□□□ -1.01
SEC61YLR378C TYR1P20049 452 aa8.76□□□□□ -1.01
SEC61YLR378C ADE1P27616 306 aa8.76□□□□□ -1.01
SEC61YLR378C RPC82P32349 654 aa8.76□□□□□ -1.01
SEC61YLR378C DOM34P33309 386 aa8.76□□□□□ -1.01
SEC61YLR378C UBP14P38237 781 aaKnown RBP8.76□□□□□ -1.01
SEC61YLR378C SWD1P39706 426 aa8.76□□□□□ -1.01
SEC61YLR378C YIL108WP40483 696 aaKnown RBP8.76□□□□□ -1.01
SEC61YLR378C MPH1P40562 993 aa8.76□□□□□ -1.01
SEC61YLR378C YJL049WP47048 450 aa8.76□□□□□ -1.01
SEC61YLR378C ART5P53244 586 aaKnown RBP8.76□□□□□ -1.01
SEC61YLR378C YGR250CP53316 781 aaKnown RBP8.76□□□□□ -1.01
SEC61YLR378C REX4Q08237 289 aa8.76□□□□□ -1.01
SEC61YLR378C YDL199CQ12407 687 aa8.76□□□□□ -1.01
SEC61YLR378C NSI1Q12457 570 aa8.76□□□□□ -1.01
SEC61YLR378C MSB2P32334 1306 aa8.76□□□□□ -1.01
SEC61YLR378C RPS17AP02407 136 aaKnown RBP8.75□□□□□ -1.01
SEC61YLR378C STE7P06784 515 aa8.75□□□□□ -1.01
SEC61YLR378C RPS17BP14127 136 aaKnown RBP8.75□□□□□ -1.01
SEC61YLR378C CBS2P14905 389 aa8.75□□□□□ -1.01
SEC61YLR378C YAP1P19880 650 aaKnown RBP8.75□□□□□ -1.01
SEC61YLR378C PPH21P23594 369 aa8.75□□□□□ -1.01
SEC61YLR378C UBC8P28263 218 aa8.75□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms