RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W CCT2P39076 527 aaKnown RBP3.32□□□□□ -1.88
SMD2YLR275W PRM5P40476 318 aa3.32□□□□□ -1.88
SMD2YLR275W LAM5P43560 674 aa3.32□□□□□ -1.88
SMD2YLR275W NCA3P46955 337 aa3.32□□□□□ -1.88
SMD2YLR275W SUB1P54000 292 aaKnown RBP3.32□□□□□ -1.88
SMD2YLR275W GIR2Q03768 265 aaPredicted RBP3.32□□□□□ -1.88
SMD2YLR275W HSP31Q04432 237 aa3.32□□□□□ -1.88
SMD2YLR275W RAD61Q99359 647 aa3.32□□□□□ -1.88
SMD2YLR275W YLR278CQ05854 1341 aa3.31□□□□□ -1.88
SMD2YLR275W ADH2P00331 348 aaKnown RBP3.31□□□□□ -1.88
SMD2YLR275W MRP7P12687 371 aa3.31□□□□□ -1.88
SMD2YLR275W PET123P17558 318 aa3.31□□□□□ -1.88
SMD2YLR275W CDC60P26637 1090 aaKnown RBP3.31□□□□□ -1.88
SMD2YLR275W PRP21P32524 280 aaPredicted RBP3.31□□□□□ -1.88
SMD2YLR275W ECM25P32525 599 aa3.31□□□□□ -1.88
SMD2YLR275W SPR1P32603 445 aa3.31□□□□□ -1.88
SMD2YLR275W PIM1P36775 1133 aa3.31□□□□□ -1.88
SMD2YLR275W VTC2P43585 828 aa3.31□□□□□ -1.88
SMD2YLR275W YGL039WP53183 348 aaKnown RBP3.31□□□□□ -1.88
SMD2YLR275W YDR387CQ04162 555 aa3.31□□□□□ -1.88
SMD2YLR275W HRI1Q05905 244 aaKnown RBP3.31□□□□□ -1.88
SMD2YLR275W BSC6Q08280 497 aa3.31□□□□□ -1.88
SMD2YLR275W BUD21Q08492 214 aaPredicted RBP3.31□□□□□ -1.88
SMD2YLR275W TIM18Q08749 192 aa3.31□□□□□ -1.88
SMD2YLR275W PKH2Q12236 1081 aaKnown RBP3.31□□□□□ -1.88
SMD2YLR275W APE2P32454 952 aaKnown RBP3.3□□□□□ -1.88
SMD2YLR275W HXT1P32465 570 aa3.3□□□□□ -1.88
SMD2YLR275W SMF1P38925 575 aa3.3□□□□□ -1.88
SMD2YLR275W ECM27P47144 725 aa3.3□□□□□ -1.88
SMD2YLR275W YPR022CQ12139 1133 aa3.3□□□□□ -1.88
SMD2YLR275W GRX6Q12438 231 aa3.3□□□□□ -1.88
SMD2YLR275W HIS4P00815 799 aaKnown RBP3.29□□□□□ -1.88
SMD2YLR275W GPH1P06738 902 aaKnown RBP3.29□□□□□ -1.88
SMD2YLR275W RPI1P23250 407 aaKnown RBP3.29□□□□□ -1.88
SMD2YLR275W PPH22P23595 377 aa3.29□□□□□ -1.88
SMD2YLR275W DAL2P25335 343 aa3.29□□□□□ -1.88
SMD2YLR275W RVS161P25343 265 aaKnown RBP3.29□□□□□ -1.88
SMD2YLR275W OTU2P38747 307 aaKnown RBP3.29□□□□□ -1.88
SMD2YLR275W MTC6P38849 526 aa3.29□□□□□ -1.88
SMD2YLR275W IRC6P43615 237 aa3.29□□□□□ -1.88
SMD2YLR275W TIS11P47977 285 aa3.29□□□□□ -1.88
SMD2YLR275W HER2Q03557 464 aa3.29□□□□□ -1.88
SMD2YLR275W RBD2Q12270 262 aa3.29□□□□□ -1.88
SMD2YLR275W MET17P06106 444 aa3.28□□□□□ -1.88
SMD2YLR275W HXT3P32466 567 aaKnown RBP3.28□□□□□ -1.88
SMD2YLR275W PAN6P40459 309 aa3.28□□□□□ -1.88
SMD2YLR275W YIF1P53845 314 aaKnown RBP3.28□□□□□ -1.88
SMD2YLR275W YLR152CP54072 576 aa3.28□□□□□ -1.88
SMD2YLR275W HXT11P54862 567 aa3.28□□□□□ -1.88
SMD2YLR275W YMR181CQ03231 154 aa3.28□□□□□ -1.88
SMD2YLR275W PPM1Q04081 328 aa3.28□□□□□ -1.88
SMD2YLR275W RIP1P08067 215 aa3.27□□□□□ -1.89
SMD2YLR275W RPL3P14126 387 aaKnown RBP3.27□□□□□ -1.89
SMD2YLR275W CKA1P15790 372 aa3.27□□□□□ -1.89
SMD2YLR275W ROX1P25042 368 aa3.27□□□□□ -1.89
SMD2YLR275W ITR1P30605 584 aa3.27□□□□□ -1.89
SMD2YLR275W VHC1P38329 1120 aa3.27□□□□□ -1.89
SMD2YLR275W YNR048WP53740 393 aa3.27□□□□□ -1.89
SMD2YLR275W FRE4P53746 719 aa3.27□□□□□ -1.89
SMD2YLR275W MDG1P53885 366 aa3.27□□□□□ -1.89
SMD2YLR275W VTA1Q06263 330 aa3.27□□□□□ -1.89
SMD2YLR275W MNS1P32906 549 aa3.26□□□□□ -1.89
SMD2YLR275W MSG5P38590 489 aa3.26□□□□□ -1.89
SMD2YLR275W YHR054CP38780 354 aa3.26□□□□□ -1.89
SMD2YLR275W ESL1P40456 1118 aa3.26□□□□□ -1.89
SMD2YLR275W SGT1Q08446 395 aa3.26□□□□□ -1.89
SMD2YLR275W TEF1P02994 458 aaKnown RBP3.25□□□□□ -1.89
SMD2YLR275W ARG4P04076 463 aaPredicted RBP3.25□□□□□ -1.89
SMD2YLR275W RPS8AP0CX39 200 aaKnown RBP3.25□□□□□ -1.89
SMD2YLR275W RPS8BP0CX40 200 aaKnown RBP3.25□□□□□ -1.89
SMD2YLR275W SEC63P14906 663 aa3.25□□□□□ -1.89
SMD2YLR275W SLY1P22213 666 aa3.25□□□□□ -1.89
SMD2YLR275W SWE1P32944 819 aa3.25□□□□□ -1.89
SMD2YLR275W YBR137WP38276 179 aa3.25□□□□□ -1.89
SMD2YLR275W LYS1P38998 373 aaRIP-Chip data3.25□□□□□ -1.89not detected
SMD2YLR275W SAS2P40963 338 aa3.25□□□□□ -1.89
SMD2YLR275W MNP1P53163 194 aaPredicted RBP3.25□□□□□ -1.89
SMD2YLR275W MRPL19P53875 158 aa3.25□□□□□ -1.89
SMD2YLR275W PEX25Q02969 394 aa3.25□□□□□ -1.89
SMD2YLR275W SYF1Q04048 859 aaPredicted RBP3.25□□□□□ -1.89
SMD2YLR275W YMR027WQ04371 470 aa3.25□□□□□ -1.89
SMD2YLR275W SNX3Q08826 162 aaKnown RBP3.25□□□□□ -1.89
SMD2YLR275W TRP1P00912 224 aa3.24□□□□□ -1.89
SMD2YLR275W SHY1P53266 389 aa3.24□□□□□ -1.89
SMD2YLR275W MTM1P53320 366 aa3.24□□□□□ -1.89
SMD2YLR275W CWC25P53854 179 aaKnown RBP3.24□□□□□ -1.89
SMD2YLR275W RPA49Q01080 415 aaPredicted RBP3.24□□□□□ -1.89
SMD2YLR275W SIL1Q08199 421 aa3.24□□□□□ -1.89
SMD2YLR275W WTM1Q12363 437 aaKnown RBP3.24□□□□□ -1.89
SMD2YLR275W SOD1P00445 154 aaKnown RBP3.23□□□□□ -1.89
SMD2YLR275W LSB5P25369 354 aa3.23□□□□□ -1.89
SMD2YLR275W MUD1P32605 298 aaKnown RBP3.23□□□□□ -1.89
SMD2YLR275W PRS1P32895 427 aaKnown RBP3.23□□□□□ -1.89
SMD2YLR275W KKQ8P36004 724 aa3.23□□□□□ -1.89
SMD2YLR275W ARA1P38115 344 aa3.23□□□□□ -1.89
SMD2YLR275W NAB3P38996 802 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SMD2YLR275W NDE1P40215 560 aa3.23□□□□□ -1.89
SMD2YLR275W DLD2P46681 530 aaKnown RBP3.23□□□□□ -1.89
SMD2YLR275W YJR011CP47086 261 aaPredicted RBP3.23□□□□□ -1.89
SMD2YLR275W HMS2P47175 358 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms