RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	YMC2	P38087	329 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	TSC10	P38342	320 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	KEL1	P38853	1164 aa	Known RBP	1.33	□□□□□ -2.2
YCS4	YLR272C	MIT1	P40002	666 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	SMC3	P47037	1230 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	STE24	P47154	453 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	INA17	Q02888	182 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	ATG23	Q06671	453 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	MCH1	Q07376	486 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	BSC1	Q12140	328 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	HMS1	Q12398	434 aa		1.33	□□□□□ -2.2
YCS4	YLR272C	RPL1A	P0CX43	217 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	RPL1B	P0CX44	217 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	IES6	P32617	166 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	RAD23	P32628	398 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	SUR1	P33300	382 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	MRPL4	P36517	319 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	DUG2	P38149	878 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	SWC5	P38326	303 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	RPA34	P47006	233 aa	Predicted RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	ALT2	P52892	507 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	1.32	□□□□□ -2.2	not detected
YCS4	YLR272C	COQ11	Q05892	277 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	MDM30	Q05930	598 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	MRI1	Q06489	411 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	LDS2	Q08218	356 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	SAC3	P46674	1301 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	BNR1	P40450	1375 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	MDM10	P18409	493 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	YCR100C	P25606	316 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	BUD14	P27637	709 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	POT1	P27796	417 aa	Known RBP RIP-Chip data	1.32	□□□□□ -2.2	not detected
YCS4	YLR272C	MYO3	P36006	1272 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	DAD2	P36162	133 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	NAT2	P37293	288 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	RIM2	P38127	377 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	FET3	P38993	636 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	LIA1	P47120	325 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	PNC1	P53184	216 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	CCE1	Q03702	353 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	GIS1	Q03833	894 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	POS5	Q06892	414 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	RPS10A	Q08745	105 aa	Predicted RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	UBX3	Q12229	455 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	FLO11	P08640	1367 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	YSC83	P32792	385 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	MSN2	P33748	704 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	HOT13	P36078	116 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	YHR131C	P38835	850 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	PRP39	P39682	629 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	YIL024C	P40543	189 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	AIP1	P46680	615 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	MSY1	P48527	492 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	ASN2	P49090	572 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	KEL2	P50090	882 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	MPS2	P53159	387 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	YGR018C	P53211	109 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	LSC1	P53598	329 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	FRE4	P53746	719 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	YNL092W	P53934	400 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	SMX3	P54999	86 aa	Predicted RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	YMR178W	Q03219	274 aa	Known RBP	1.32	□□□□□ -2.2
YCS4	YLR272C	FIN1	Q03898	291 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	ATG26	Q06321	1198 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	VAC14	Q06708	880 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	APC5	Q08683	685 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	YPR022C	Q12139	1133 aa		1.32	□□□□□ -2.2
YCS4	YLR272C	CDC6	P09119	513 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	TUB1	P09733	447 aa	Known RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	BIK1	P11709	440 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	UNG1	P12887	359 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	CLN3	P13365	580 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	EXO70	P19658	623 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	MNS1	P32906	549 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	RIB5	P38145	238 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	LYS1	P38998	373 aa	RIP-Chip data	1.31	□□□□□ -2.2	RIP-Chip
YCS4	YLR272C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	1.31	□□□□□ -2.2	RIP-Chip
YCS4	YLR272C	AIM24	P47127	394 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	YNL058C	P53947	316 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	RPA49	Q01080	415 aa	Predicted RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	RLI1	Q03195	608 aa	Known RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	YDR132C	Q03900	495 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	SLF1	Q12034	447 aa	Known RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	BAG7	Q12128	409 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	LSP1	Q12230	341 aa	Known RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	EAF3	Q12432	401 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	TAL1	P15019	335 aa	Known RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	STE11	P23561	717 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	WBP1	P33767	430 aa	Known RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	SWD2	P36104	329 aa	Predicted RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	QDR3	P38227	689 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	ERG7	P38604	731 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	SHO1	P40073	367 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	YNL208W	P40159	199 aa	Known RBP	1.31	□□□□□ -2.2
YCS4	YLR272C	SNO3	P43544	222 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	BNA6	P43619	295 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	ATG27	P46989	271 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	YGL185C	P53100	379 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	SNF12	P53628	566 aa		1.31	□□□□□ -2.2
YCS4	YLR272C	ATC1	Q04005	294 aa		1.31	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 159.7 ms