RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	DAL81	P21657	970 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	VMA16	P23968	213 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	GSY2	P27472	705 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	GPI10	P30777	616 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	CDC5	P32562	705 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	ALY1	P36117	915 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	MRPL10	P36520	322 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	APE3	P37302	537 aa	Known RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	TAE1	P38340	232 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	WSS1	P38838	269 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	AIM2	P39721	246 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	RPH1	P39956	796 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	MRX1	P40050	688 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	ATM1	P40416	690 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	ASG1	P40467	964 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	IMA5	P40884	581 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	MAD2	P40958	196 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	STB1	P42845	420 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	QRI7	P43122	407 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	NMD5	P46970	1048 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	NPA3	P47122	385 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	EMC2	P47133	292 aa	Known RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	IMD4	P50094	524 aa	Known RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	FMS1	P50264	508 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	CUL3	P53202	744 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	ART5	P53244	586 aa	Known RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	YGR250C	P53316	781 aa	Known RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	COS6	P53344	381 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	RRN9	P53437	365 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
YKT6	YKL196C	CBK1	P53894	756 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	DIA1	P54005	336 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	NUP116	Q02630	1113 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	CTF19	Q02732	369 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	DCR2	Q05924	578 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	BSP1	Q06604	576 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	LUC7	Q07508	261 aa	Predicted RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	ESA1	Q08649	445 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	GPN2	Q08726	347 aa	Predicted RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	FYV7	Q12247	151 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	RDL1	Q12305	139 aa	Known RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	LDB17	Q12342	491 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	AHA1	Q12449	350 aa	Known RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	SKM1	Q12469	655 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	ARP6	Q12509	438 aa		3.36	□□□□□ -1.87
YKT6	YKL196C	RRP12	Q12754	1228 aa	Known RBP	3.36	□□□□□ -1.87
YKT6	YKL196C	MYO4	P32492	1471 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	GCN4	P03069	281 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	GAL4	P04386	881 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	GPH1	P06738	902 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	PRB1	P09232	635 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	RPL27A	P0C2H6	136 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	RPL27B	P0C2H7	136 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	SEC12	P11655	471 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	CDC42	P19073	191 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	GIT1	P25346	518 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	RHB1	P25378	209 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	BUD23	P25627	275 aa	Predicted RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	MCM4	P30665	933 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	HXT1	P32465	570 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	SSE2	P32590	693 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	GDA1	P32621	518 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	RAD24	P32641	659 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	RPT5	P33297	434 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	SLC1	P33333	303 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	KKQ8	P36004	724 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	MUD2	P36084	527 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	MRX3	P38172	270 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	RIP-Chip
YKT6	YKL196C	FIG1	P38224	298 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	PCL6	P40038	420 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	ICE2	P40499	491 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	GVP36	P40531	326 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	OPT1	P40897	799 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	LCB2	P40970	561 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	LYS14	P40971	790 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	TFG2	P41896	400 aa	Predicted RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	FET5	P43561	622 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	RTT101	P47050	842 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	LSM8	P47093	109 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	IBA57	P47158	497 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	YJR141W	P47172	347 aa	Predicted RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	PUS4	P48567	403 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	YGL204C	P53089	101 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	SLD3	P53135	668 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	ZPR1	P53303	486 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	SOL4	P53315	255 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	RCF2	P53721	224 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	PDR16	P53860	351 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	ADE16	P54113	591 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	YKR005C	Q02203	525 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	PET117	Q02771	107 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	YMD8	Q03697	442 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	RCO1	Q04779	684 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	HRD3	Q05787	833 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	TFC6	Q06339	672 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	ATG23	Q06671	453 aa		3.35	□□□□□ -1.87
YKT6	YKL196C	SDO1	Q07953	250 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	DIS3	Q08162	1001 aa	Known RBP	3.35	□□□□□ -1.87
YKT6	YKL196C	BBP1	Q12365	385 aa		3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms