RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	COG3	P40094	801 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	LYS12	P40495	371 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	PBP1	P53297	722 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	TPS1	Q00764	495 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	GOT1	Q03554	138 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	RSM24	Q03976	319 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	YMR034C	Q05131	434 aa	Predicted RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	GRX8	Q05926	109 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	DIN7	Q12086	430 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	YOS9	Q99220	542 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	PRI2	P20457	528 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	DBP1	P24784	617 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	PMI40	P29952	429 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	RRP3	P38712	501 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	RGA1	P39083	1007 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	PEX21	P50091	288 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	CWC23	P52868	283 aa	Predicted RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	PEX25	Q02969	394 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	EMI1	Q04406	187 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	YDL114W	Q07530	308 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	ICL2	Q12031	575 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PAN1	YIR006C	GTT2	Q12390	233 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	YPR1	Q12458	312 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	CDC21	P06785	304 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	HTS1	P07263	546 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	DIT1	P21623	536 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	PET112	P33893	541 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	MAE1	P36013	669 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	SEA4	P38164	1038 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	MED6	P38782	295 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	DLD2	P46681	530 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	IMD4	P50094	524 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	ROG1	P53118	685 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	SED5	Q01590	340 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	RPN4	Q03465	531 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	RIM13	Q03792	727 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	DCR2	Q05924	578 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	YLR225C	Q05948	407 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	BLS1	Q06071	122 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PAN1	YIR006C	PCL9	Q12477	304 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	SUC2	P00724	532 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	TPK3	P05986	398 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	MER1	P16523	270 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	OLE1	P21147	510 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	BCK2	P33306	851 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	PEX32	P38292	413 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	YBR242W	P38331	238 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	OSH7	P38755	437 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	VPS29	P38759	282 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	YER137C	P40083	148 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	PHB2	P50085	310 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	VOA1	P53262	265 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	VPS36	Q06696	566 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	YNG1	Q08465	219 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	SNX3	Q08826	162 aa	Known RBP	4.53	□□□□□ -1.68
PAN1	YIR006C	BAG7	Q12128	409 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	YOR022C	Q12204	715 aa		4.53	□□□□□ -1.68
PAN1	YIR006C	COX5A	P00424	153 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	HMG1	P12683	1054 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	SIP2	P34164	415 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	CHL4	P38907	458 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	KRE29	P40026	464 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	AYR1	P40471	297 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	SFH5	P47008	294 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	LSM1	P47017	172 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	YAT1	P80235	687 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	NUP100	Q02629	959 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	RRP45	Q05636	305 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	MRI1	Q06489	411 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	RHO1	P06780	209 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	CMP2	P14747	604 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	IDI1	P15496	288 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	PHO84	P25297	587 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	BUD23	P25627	275 aa	Predicted RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	CAF4	P36130	643 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	MNN9	P39107	395 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	GIM4	P40005	111 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	YGR201C	P42936	225 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	IDS2	P46958	469 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	ALB1	P47019	175 aa	Predicted RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	SWC4	P53201	476 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	GND2	P53319	492 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	PEX13	P80667	386 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	CIA1	Q05583	330 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	YLR012C	Q07927	99 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	RAX1	Q08760	435 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	NMD4	Q12129	218 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	SRF1	Q12516	437 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	GCN4	P03069	281 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	KIN2	P13186	1147 aa	Known RBP	4.52	□□□□□ -1.69
PAN1	YIR006C	CDC23	P16522	626 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	SET3	P36124	751 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	YBR139W	P38109	508 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	CTP1	P38152	299 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	FUI1	P38196	639 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	FTH1	P38310	465 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	ARN2	P38724	620 aa		4.52	□□□□□ -1.69
PAN1	YIR006C	AFG3	P39925	761 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms