RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	UFO1	Q04511	668 aa		4.87	□□□□□ -1.63
UBP7	YIL156W	VAC14	Q06708	880 aa		4.87	□□□□□ -1.63
UBP7	YIL156W	LEA1	Q08963	238 aa	Predicted RBP	4.87	□□□□□ -1.63
UBP7	YIL156W	TGS1	Q12052	315 aa		4.87	□□□□□ -1.63
UBP7	YIL156W	BUG1	Q12191	341 aa		4.87	□□□□□ -1.63
UBP7	YIL156W	YDL177C	Q12257	170 aa		4.87	□□□□□ -1.63
UBP7	YIL156W	KRE2	P27809	442 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	GDA1	P32621	518 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	YNL134C	P53912	376 aa	Known RBP	4.86	□□□□□ -1.63
UBP7	YIL156W	SLG1	P54867	378 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	CAB5	Q03941	241 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	DLT1	Q04216	342 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	POS5	Q06892	414 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	USV1	Q12132	391 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	COR1	P07256	457 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	RIP1	P08067	215 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	COQ2	P32378	372 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	ASF2	P32448	525 aa	Predicted RBP	4.86	□□□□□ -1.63
UBP7	YIL156W	ERG7	P38604	731 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	TCD1	P38756	429 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	MBB1	P39534	108 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	YER130C	P39959	443 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	CGR1	P53188	120 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	NMA2	P53204	395 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	YGR151C	P53287	111 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	STD1	Q02794	444 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	HPF1	Q05164	967 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	RKI1	Q12189	258 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	LAS17	Q12446	633 aa		4.86	□□□□□ -1.63
UBP7	YIL156W	YPR089W	O13585	888 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	YMR085W	P0CF18	432 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	ERG11	P10614	530 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	ABF1	P14164	731 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	MSS116	P15424	664 aa	Known RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	HIS7	P33734	552 aa	Known RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	VHC1	P38329	1120 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	VBA2	P38358	474 aa	Known RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	LAS21	P40367	830 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	YMR102C	Q03177	834 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	RRG8	Q06109	277 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	ACK1	Q07622	623 aa	Predicted RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	ETT1	Q08421	412 aa	Known RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	RKM1	Q08961	583 aa	Predicted RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	YLR122C	Q12312	125 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	RHO2	P06781	192 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	KRS1	P15180	591 aa	Known RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	MEK1	P24719	497 aa	Predicted RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	KRE6	P32486	720 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	TRM2	P33753	639 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	GPI16	P38875	610 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	PIB2	P53191	635 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	ERG26	P53199	349 aa	Known RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	TRS23	Q03784	219 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	YLR224W	Q05947	369 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	ECM7	Q06200	448 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	YPR078C	Q06813	372 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	MET3	P08536	511 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	STE4	P18851	423 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	GID7	P25569	745 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	SKN7	P38889	622 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	SAP1	P39955	897 aa	Known RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	YGR126W	P53274	230 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	SNO2	P53823	222 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	MDM30	Q05930	598 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	TSR1	Q07381	788 aa	Known RBP	4.85	□□□□□ -1.63
UBP7	YIL156W	MED4	Q12343	284 aa		4.85	□□□□□ -1.63
UBP7	YIL156W	PSO2	P30620	661 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	SUA5	P32579	426 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
UBP7	YIL156W	APL3	P38065	1025 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	SPP381	P38282	291 aa	Predicted RBP	4.84	□□□□□ -1.63
UBP7	YIL156W	TDA6	Q06466	467 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	RPS10A	Q08745	105 aa	Predicted RBP	4.84	□□□□□ -1.63
UBP7	YIL156W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
UBP7	YIL156W	GIS3	Q12418	502 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	SGV1	P23293	657 aa	Known RBP	4.84	□□□□□ -1.63
UBP7	YIL156W	RHB1	P25378	209 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	MGR1	P25573	417 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	ECM25	P32525	599 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	RAV1	P47104	1357 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	VOA1	P53262	265 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	COG2	P53271	262 aa		4.84	□□□□□ -1.63
UBP7	YIL156W	GCN2	P15442	1659 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	SIN4	P32259	974 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	EFB1	P32471	206 aa	Known RBP	4.84	□□□□□ -1.64
UBP7	YIL156W	DUG2	P38149	878 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	DBP8	P38719	431 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	PET100	P38958	111 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	STN1	P38960	494 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	RTR1	P40084	226 aa	Predicted RBP	4.84	□□□□□ -1.64
UBP7	YIL156W	TAX4	P47030	604 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	TIM21	P53220	239 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	GCN5	Q03330	439 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	EMI2	Q04409	500 aa	Known RBP	4.84	□□□□□ -1.64
UBP7	YIL156W	ECM30	Q06673	1274 aa		4.84	□□□□□ -1.64
UBP7	YIL156W	DCP1	Q12517	231 aa	Predicted RBP	4.84	□□□□□ -1.64
UBP7	YIL156W	GPA1	P08539	472 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	KAP104	P38217	918 aa	Known RBP	4.83	□□□□□ -1.64
UBP7	YIL156W	OLA1	P38219	394 aa	Known RBP	4.83	□□□□□ -1.64
UBP7	YIL156W	ANS1	P38832	159 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms