RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C MEX67Q99257 599 aaKnown RBP4□□□□□ -1.77
SDS3YIL084C ILV1P00927 576 aaKnown RBP3.99□□□□□ -1.77
SDS3YIL084C ARG3P05150 338 aa3.99□□□□□ -1.77
SDS3YIL084C HNM1P19807 563 aa3.99□□□□□ -1.77
SDS3YIL084C TYR1P20049 452 aa3.99□□□□□ -1.77
SDS3YIL084C PAP1P29468 568 aaKnown RBP3.99□□□□□ -1.77
SDS3YIL084C YME1P32795 747 aa3.99□□□□□ -1.77
SDS3YIL084C TRS65P32893 560 aa3.99□□□□□ -1.77
SDS3YIL084C BUD2P33314 1104 aa3.99□□□□□ -1.77
SDS3YIL084C MSR1P38714 643 aa3.99□□□□□ -1.77
SDS3YIL084C BZZ1P38822 633 aa3.99□□□□□ -1.77
SDS3YIL084C SPO22P40511 975 aa3.99□□□□□ -1.77
SDS3YIL084C SGN1P40561 250 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
SDS3YIL084C AXL1P40851 1208 aa3.99□□□□□ -1.77
SDS3YIL084C IRC6P43615 237 aa3.99□□□□□ -1.77
SDS3YIL084C ATG27P46989 271 aa3.99□□□□□ -1.77
SDS3YIL084C CUL3P53202 744 aa3.99□□□□□ -1.77
SDS3YIL084C MRPL19P53875 158 aa3.99□□□□□ -1.77
SDS3YIL084C SMA1Q02651 245 aa3.99□□□□□ -1.77
SDS3YIL084C MSC1Q03104 513 aa3.99□□□□□ -1.77
SDS3YIL084C AIM33Q04516 312 aa3.99□□□□□ -1.77
SDS3YIL084C GRS2Q06817 618 aa3.99□□□□□ -1.77
SDS3YIL084C YDL057WQ07379 328 aa3.99□□□□□ -1.77
SDS3YIL084C RLM1Q12224 676 aa3.99□□□□□ -1.77
SDS3YIL084C MSB2P32334 1306 aa3.98□□□□□ -1.77
SDS3YIL084C MAS1P10507 462 aa3.98□□□□□ -1.77
SDS3YIL084C PEP5P12868 1029 aa3.98□□□□□ -1.77
SDS3YIL084C RME1P32338 300 aaKnown RBP3.98□□□□□ -1.77
SDS3YIL084C YNK1P36010 153 aaKnown RBP3.98□□□□□ -1.77
SDS3YIL084C HEL1P36113 551 aa3.98□□□□□ -1.77
SDS3YIL084C YIR014WP40570 242 aa3.98□□□□□ -1.77
SDS3YIL084C MET28P40573 187 aa3.98□□□□□ -1.77
SDS3YIL084C ALK1P43633 760 aaKnown RBP3.98□□□□□ -1.77
SDS3YIL084C SRB7P47822 140 aa3.98□□□□□ -1.77
SDS3YIL084C TOF2Q02208 771 aa3.98□□□□□ -1.77
SDS3YIL084C YPL014WQ02606 381 aa3.98□□□□□ -1.77
SDS3YIL084C MSS11Q03825 758 aa3.98□□□□□ -1.77
SDS3YIL084C IRA1P18963 3092 aa3.97□□□□□ -1.77
SDS3YIL084C CDC31P06704 161 aaKnown RBP3.97□□□□□ -1.77
SDS3YIL084C PEX34P25584 144 aa3.97□□□□□ -1.77
SDS3YIL084C WBP1P33767 430 aaKnown RBP3.97□□□□□ -1.77
SDS3YIL084C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SDS3YIL084C SPC34P36131 295 aa3.97□□□□□ -1.77
SDS3YIL084C AZF1P41696 914 aa3.97□□□□□ -1.77
SDS3YIL084C ROK1P45818 564 aaPredicted RBP3.97□□□□□ -1.77
SDS3YIL084C RHO4Q00246 291 aa3.97□□□□□ -1.77
SDS3YIL084C YDR239CQ03780 787 aa3.97□□□□□ -1.77
SDS3YIL084C YDR341CQ05506 607 aaKnown RBP3.97□□□□□ -1.77
SDS3YIL084C GLO2Q05584 274 aa3.97□□□□□ -1.77
SDS3YIL084C NSE1Q07913 336 aa3.97□□□□□ -1.77
SDS3YIL084C PLP2Q12017 286 aa3.97□□□□□ -1.77
SDS3YIL084C RIM20Q12033 661 aa3.97□□□□□ -1.77
SDS3YIL084C BSC1Q12140 328 aa3.97□□□□□ -1.77
SDS3YIL084C HIF1Q12373 385 aa3.97□□□□□ -1.77
SDS3YIL084C HSH49Q99181 213 aaPredicted RBP3.97□□□□□ -1.77
SDS3YIL084C RSA4P25382 515 aaKnown RBP3.96□□□□□ -1.78
SDS3YIL084C ERG1P32476 496 aaKnown RBP3.96□□□□□ -1.78
SDS3YIL084C VPS17P32913 551 aa3.96□□□□□ -1.78
SDS3YIL084C YHR210CP38893 341 aa3.96□□□□□ -1.78
SDS3YIL084C YEL057CP39983 233 aa3.96□□□□□ -1.78
SDS3YIL084C GPD2P41911 440 aaKnown RBP3.96□□□□□ -1.78
SDS3YIL084C PET130P47065 347 aa3.96□□□□□ -1.78
SDS3YIL084C TDA7P53882 636 aaPredicted RBP3.96□□□□□ -1.78
SDS3YIL084C COQ9Q05779 260 aa3.96□□□□□ -1.78
SDS3YIL084C YEH2Q07950 538 aa3.96□□□□□ -1.78
SDS3YIL084C THP1Q08231 455 aa3.96□□□□□ -1.78
SDS3YIL084C BAR1P12630 587 aa3.95□□□□□ -1.78
SDS3YIL084C CLN3P13365 580 aa3.95□□□□□ -1.78
SDS3YIL084C CKA1P15790 372 aa3.95□□□□□ -1.78
SDS3YIL084C ACH1P32316 526 aa3.95□□□□□ -1.78
SDS3YIL084C MRE11P32829 692 aa3.95□□□□□ -1.78
SDS3YIL084C RXT2P38255 430 aa3.95□□□□□ -1.78
SDS3YIL084C VID24P38263 362 aa3.95□□□□□ -1.78
SDS3YIL084C TWF1P53250 332 aa3.95□□□□□ -1.78
SDS3YIL084C BNI5P53890 448 aaKnown RBP3.95□□□□□ -1.78
SDS3YIL084C SAM50P53969 484 aa3.95□□□□□ -1.78
SDS3YIL084C DIC1Q06143 298 aa3.95□□□□□ -1.78
SDS3YIL084C NKP2Q06162 153 aa3.95□□□□□ -1.78
SDS3YIL084C FMP45Q07651 309 aa3.95□□□□□ -1.78
SDS3YIL084C SMC5Q08204 1093 aa3.95□□□□□ -1.78
SDS3YIL084C ATG29Q12092 213 aa3.95□□□□□ -1.78
SDS3YIL084C NCE102Q12207 173 aaRIP-Chip data3.95□□□□□ -1.78not detected
SDS3YIL084C PDH1Q12428 516 aaKnown RBP3.95□□□□□ -1.78
SDS3YIL084C SEC39Q12745 709 aa3.95□□□□□ -1.78
SDS3YIL084C BRR1Q99177 341 aaPredicted RBP3.95□□□□□ -1.78
SDS3YIL084C COX4P04037 155 aa3.94□□□□□ -1.78
SDS3YIL084C PEP4P07267 405 aaKnown RBP3.94□□□□□ -1.78
SDS3YIL084C GLN3P18494 730 aa3.94□□□□□ -1.78
SDS3YIL084C SEC62P21825 274 aa3.94□□□□□ -1.78
SDS3YIL084C GAA1P39012 614 aa3.94□□□□□ -1.78
SDS3YIL084C YND1P40009 630 aa3.94□□□□□ -1.78
SDS3YIL084C YJL068CP40363 299 aa3.94□□□□□ -1.78
SDS3YIL084C STB2P46679 850 aa3.94□□□□□ -1.78
SDS3YIL084C GUF1P46943 645 aa3.94□□□□□ -1.78
SDS3YIL084C YJR154WP47181 346 aa3.94□□□□□ -1.78
SDS3YIL084C BUD32P53323 261 aa3.94□□□□□ -1.78
SDS3YIL084C THI20Q08224 551 aa3.94□□□□□ -1.78
SDS3YIL084C YOR365CQ08844 703 aa3.94□□□□□ -1.78
SDS3YIL084C MET17P06106 444 aa3.93□□□□□ -1.78
SDS3YIL084C RED1P14291 827 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms