RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W SWF1Q04629 336 aa9.65□□□□□ -0.86
UBA4YHR111W GLO2Q05584 274 aa9.65□□□□□ -0.86
UBA4YHR111W YEH2Q07950 538 aa9.65□□□□□ -0.86
UBA4YHR111W SLF1Q12034 447 aaKnown RBP9.65□□□□□ -0.86
UBA4YHR111W SLH1P53327 1967 aaKnown RBP9.65□□□□□ -0.87
UBA4YHR111W CAR1P00812 333 aaKnown RBP9.64□□□□□ -0.87
UBA4YHR111W VPS33P20795 691 aa9.64□□□□□ -0.87
UBA4YHR111W SLM5P25345 492 aaKnown RBP9.64□□□□□ -0.87
UBA4YHR111W PHO87P25360 923 aa9.64□□□□□ -0.87
UBA4YHR111W ATO2P32907 282 aa9.64□□□□□ -0.87
UBA4YHR111W SPO23P33757 523 aa9.64□□□□□ -0.87
UBA4YHR111W PTC1P35182 281 aa9.64□□□□□ -0.87
UBA4YHR111W TRS85P46944 698 aa9.64□□□□□ -0.87
UBA4YHR111W IKS1P47042 667 aa9.64□□□□□ -0.87
UBA4YHR111W SHE9Q04172 456 aa9.64□□□□□ -0.87
UBA4YHR111W UAF30Q08747 228 aa9.64□□□□□ -0.87
UBA4YHR111W GET4Q12125 312 aa9.64□□□□□ -0.87
UBA4YHR111W HUA2Q12134 243 aa9.64□□□□□ -0.87
UBA4YHR111W YBR056W-AI2HB52 66 aa9.63□□□□□ -0.87
UBA4YHR111W COX1P00401 534 aa9.63□□□□□ -0.87
UBA4YHR111W HTA2P04912 132 aa9.63□□□□□ -0.87
UBA4YHR111W STE7P06784 515 aa9.63□□□□□ -0.87
UBA4YHR111W CDC26P14724 124 aa9.63□□□□□ -0.87
UBA4YHR111W NPR1P22211 790 aa9.63□□□□□ -0.87
UBA4YHR111W NPP1P25353 742 aa9.63□□□□□ -0.87
UBA4YHR111W FAA1P30624 700 aaKnown RBP9.63□□□□□ -0.87
UBA4YHR111W STE14P32584 239 aa9.63□□□□□ -0.87
UBA4YHR111W MRE11P32829 692 aa9.63□□□□□ -0.87
UBA4YHR111W YBL029WP38201 376 aa9.63□□□□□ -0.87
UBA4YHR111W COS111P38308 924 aa9.63□□□□□ -0.87
UBA4YHR111W MBP1P39678 833 aa9.63□□□□□ -0.87
UBA4YHR111W TIM54P47045 478 aa9.63□□□□□ -0.87
UBA4YHR111W YOL024WQ08172 172 aa9.63□□□□□ -0.87
UBA4YHR111W NTO1Q12311 748 aa9.63□□□□□ -0.87
UBA4YHR111W YPT6Q99260 215 aa9.63□□□□□ -0.87
UBA4YHR111W SPB1P25582 841 aaPredicted RBP9.62□□□□□ -0.87
UBA4YHR111W ZIP1P31111 875 aa9.62□□□□□ -0.87
UBA4YHR111W AAR2P32357 355 aaPredicted RBP9.62□□□□□ -0.87
UBA4YHR111W LST4P34239 828 aa9.62□□□□□ -0.87
UBA4YHR111W FRT2P39734 528 aa9.62□□□□□ -0.87
UBA4YHR111W YIL001WP40560 513 aa9.62□□□□□ -0.87
UBA4YHR111W UPF3P48412 387 aaKnown RBP9.62□□□□□ -0.87
UBA4YHR111W MUP1P50276 574 aa9.62□□□□□ -0.87
UBA4YHR111W SUR7P54003 302 aa9.62□□□□□ -0.87
UBA4YHR111W MSC1Q03104 513 aa9.62□□□□□ -0.87
UBA4YHR111W RQC1Q05468 723 aaKnown RBP9.62□□□□□ -0.87
UBA4YHR111W RPN5Q12250 445 aaKnown RBP9.62□□□□□ -0.87
UBA4YHR111W SYP1P25623 870 aaKnown RBP9.61□□□□□ -0.87
UBA4YHR111W YJU2P28320 278 aaPredicted RBP9.61□□□□□ -0.87
UBA4YHR111W LYP1P32487 611 aa9.61□□□□□ -0.87
UBA4YHR111W ARN1P38731 627 aa9.61□□□□□ -0.87
UBA4YHR111W FMP52P40008 231 aa9.61□□□□□ -0.87
UBA4YHR111W RNR4P49723 345 aaKnown RBP9.61□□□□□ -0.87
UBA4YHR111W SNP1Q00916 300 aaPredicted RBP9.61□□□□□ -0.87
UBA4YHR111W ENT2Q05785 613 aa9.61□□□□□ -0.87
UBA4YHR111W MSL5Q12186 476 aaKnown RBP RIP-Chip data9.61□□□□□ -0.87not detected
UBA4YHR111W SAS5Q99314 248 aa9.61□□□□□ -0.87
UBA4YHR111W YPT1P01123 206 aaKnown RBP9.6□□□□□ -0.87
UBA4YHR111W ARD1P07347 238 aaPredicted RBP9.6□□□□□ -0.87
UBA4YHR111W MSS116P15424 664 aaKnown RBP9.6□□□□□ -0.87
UBA4YHR111W PRI2P20457 528 aa9.6□□□□□ -0.87
UBA4YHR111W CMK1P27466 446 aaKnown RBP9.6□□□□□ -0.87
UBA4YHR111W FRE2P36033 711 aa9.6□□□□□ -0.87
UBA4YHR111W MNN2P38069 597 aa9.6□□□□□ -0.87
UBA4YHR111W STE24P47154 453 aa9.6□□□□□ -0.87
UBA4YHR111W GAD1Q04792 585 aa9.6□□□□□ -0.87
UBA4YHR111W DFG5Q05031 458 aa9.6□□□□□ -0.87
UBA4YHR111W MDM30Q05930 598 aa9.6□□□□□ -0.87
UBA4YHR111W FAR10Q06001 478 aa9.6□□□□□ -0.87
UBA4YHR111W JLP1Q12358 412 aa9.6□□□□□ -0.87
UBA4YHR111W DOA1P36037 715 aa9.59□□□□□ -0.87
UBA4YHR111W PTI1P39927 425 aaPredicted RBP9.59□□□□□ -0.87
UBA4YHR111W AYR1P40471 297 aa9.59□□□□□ -0.87
UBA4YHR111W SEC26P41810 973 aaKnown RBP9.59□□□□□ -0.87
UBA4YHR111W PSA1P41940 361 aaKnown RBP9.59□□□□□ -0.87
UBA4YHR111W MPS3P47069 682 aa9.59□□□□□ -0.87
UBA4YHR111W MTR3P48240 250 aaPredicted RBP9.59□□□□□ -0.87
UBA4YHR111W LCL3P53153 274 aa9.59□□□□□ -0.87
UBA4YHR111W GOR1P53839 350 aa9.59□□□□□ -0.87
UBA4YHR111W REC102Q02721 264 aa9.59□□□□□ -0.87
UBA4YHR111W LGE1Q02796 332 aaKnown RBP9.59□□□□□ -0.87
UBA4YHR111W OAZ1Q02803 292 aa9.59□□□□□ -0.87
UBA4YHR111W YPL071CQ02864 156 aa9.59□□□□□ -0.87
UBA4YHR111W YLR413WQ06689 675 aa9.59□□□□□ -0.87
UBA4YHR111W NBA1Q08229 501 aaKnown RBP9.59□□□□□ -0.87
UBA4YHR111W BDS1Q08347 646 aa9.59□□□□□ -0.87
UBA4YHR111W SGT1Q08446 395 aa9.59□□□□□ -0.87
UBA4YHR111W RAS2P01120 322 aaKnown RBP9.58□□□□□ -0.88
UBA4YHR111W ATP4P05626 244 aa9.58□□□□□ -0.88
UBA4YHR111W ALG7P07286 448 aa9.58□□□□□ -0.88
UBA4YHR111W SLY41P22215 453 aa9.58□□□□□ -0.88
UBA4YHR111W PMT2P31382 759 aa9.58□□□□□ -0.88
UBA4YHR111W ORC2P32833 620 aa9.58□□□□□ -0.88
UBA4YHR111W VPS74Q06385 345 aa9.58□□□□□ -0.88
UBA4YHR111W RRP36Q12481 300 aaPredicted RBP9.58□□□□□ -0.88
UBA4YHR111W YPR096CO13587 100 aa9.57□□□□□ -0.88
UBA4YHR111W EXO70P19658 623 aa9.57□□□□□ -0.88
UBA4YHR111W SEC62P21825 274 aa9.57□□□□□ -0.88
UBA4YHR111W CAT2P32796 670 aaKnown RBP9.57□□□□□ -0.88
UBA4YHR111W SEF1P34228 1148 aa9.57□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms