RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C HST2P53686 357 aa7.57□□□□□ -1.2
SOD2YHR008C UTP6Q02354 440 aaKnown RBP7.57□□□□□ -1.2
SOD2YHR008C ADE13Q05911 482 aaKnown RBP7.57□□□□□ -1.2
SOD2YHR008C PRP46Q12417 451 aaPredicted RBP7.57□□□□□ -1.2
SOD2YHR008C MDM12Q92328 271 aa7.57□□□□□ -1.2
SOD2YHR008C Q0144Q9ZZW2 109 aa7.57□□□□□ -1.2
SOD2YHR008C TY2A-LR1P0C2J4 438 aa7.56□□□□□ -1.2
SOD2YHR008C TY2A-FP0CX61 438 aa7.56□□□□□ -1.2
SOD2YHR008C TY2A-GR2P0CX62 438 aa7.56□□□□□ -1.2
SOD2YHR008C SRV2P17555 526 aaKnown RBP7.56□□□□□ -1.2
SOD2YHR008C TY2A-CP25383 438 aa7.56□□□□□ -1.2
SOD2YHR008C AAD3P25612 363 aa7.56□□□□□ -1.2
SOD2YHR008C BNA4P38169 460 aa7.56□□□□□ -1.2
SOD2YHR008C YGP1P38616 354 aaKnown RBP7.56□□□□□ -1.2
SOD2YHR008C ALB1P47019 175 aaPredicted RBP7.56□□□□□ -1.2
SOD2YHR008C CWC22P53333 577 aaKnown RBP7.56□□□□□ -1.2
SOD2YHR008C COG6P53959 839 aa7.56□□□□□ -1.2
SOD2YHR008C TY2A-DR2Q03483 438 aa7.56□□□□□ -1.2
SOD2YHR008C EFR3Q03653 782 aaKnown RBP7.56□□□□□ -1.2
SOD2YHR008C RQC1Q05468 723 aaKnown RBP7.56□□□□□ -1.2
SOD2YHR008C ISR1Q06098 443 aaKnown RBP7.56□□□□□ -1.2
SOD2YHR008C YLR177WQ06251 628 aa7.56□□□□□ -1.2
SOD2YHR008C TY2A-BQ12260 438 aa7.56□□□□□ -1.2
SOD2YHR008C MDY2Q12285 212 aa7.56□□□□□ -1.2
SOD2YHR008C TY2A-OR2Q12293 438 aa7.56□□□□□ -1.2
SOD2YHR008C TY2A-DR1Q12392 438 aa7.56□□□□□ -1.2
SOD2YHR008C TY2A-OR1Q12439 438 aa7.56□□□□□ -1.2
SOD2YHR008C MTR10Q99189 972 aa7.56□□□□□ -1.2
SOD2YHR008C TY2A-DR3Q99303 438 aa7.56□□□□□ -1.2
SOD2YHR008C STE7P06784 515 aa7.55□□□□□ -1.2
SOD2YHR008C AMD2P22580 549 aa7.55□□□□□ -1.2
SOD2YHR008C SEC14P24280 304 aaKnown RBP7.55□□□□□ -1.2
SOD2YHR008C FUN30P31380 1131 aa7.55□□□□□ -1.2
SOD2YHR008C STO1P34160 861 aaKnown RBP7.55□□□□□ -1.2
SOD2YHR008C LOT5P34234 306 aa7.55□□□□□ -1.2
SOD2YHR008C ARL1P38116 183 aaKnown RBP7.55□□□□□ -1.2
SOD2YHR008C YMR262WP38430 313 aa7.55□□□□□ -1.2
SOD2YHR008C RIX1P38883 763 aaPredicted RBP7.55□□□□□ -1.2
SOD2YHR008C SEC9P40357 651 aa7.55□□□□□ -1.2
SOD2YHR008C CIN1P40987 1014 aa7.55□□□□□ -1.2
SOD2YHR008C HPT1Q04178 221 aaKnown RBP7.55□□□□□ -1.2
SOD2YHR008C YLR446WQ06204 433 aa7.55□□□□□ -1.2
SOD2YHR008C ACM1Q08981 209 aa7.55□□□□□ -1.2
SOD2YHR008C Q0297Q9ZZV8 51 aa7.55□□□□□ -1.2
SOD2YHR008C CMD1P06787 147 aaKnown RBP7.54□□□□□ -1.2
SOD2YHR008C SPT3P06844 337 aa7.54□□□□□ -1.2
SOD2YHR008C CBF1P17106 351 aa7.54□□□□□ -1.2
SOD2YHR008C SLY41P22215 453 aa7.54□□□□□ -1.2
SOD2YHR008C YMR144WP40214 342 aaKnown RBP7.54□□□□□ -1.2
SOD2YHR008C HOS4P40480 1083 aa7.54□□□□□ -1.2
SOD2YHR008C YIL001WP40560 513 aa7.54□□□□□ -1.2
SOD2YHR008C YRB1P41920 201 aaKnown RBP7.54□□□□□ -1.2
SOD2YHR008C ATP22P50273 684 aaPredicted RBP7.54□□□□□ -1.2
SOD2YHR008C SLT2Q00772 484 aa7.54□□□□□ -1.2
SOD2YHR008C PLM2Q04383 521 aa7.54□□□□□ -1.2
SOD2YHR008C NMD4Q12129 218 aa7.54□□□□□ -1.2
SOD2YHR008C HEM2P05373 342 aa7.53□□□□□ -1.2
SOD2YHR008C PHO87P25360 923 aa7.53□□□□□ -1.2
SOD2YHR008C BET3P36149 193 aa7.53□□□□□ -1.2
SOD2YHR008C BMT2P38278 337 aa7.53□□□□□ -1.2
SOD2YHR008C HRB1P38922 454 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
SOD2YHR008C SOK1P40317 901 aa7.53□□□□□ -1.2
SOD2YHR008C YIL169CP40442 995 aa7.53□□□□□ -1.2
SOD2YHR008C MIC19P43594 170 aa7.53□□□□□ -1.2
SOD2YHR008C NMD5P46970 1048 aa7.53□□□□□ -1.2
SOD2YHR008C APS3P47064 194 aa7.53□□□□□ -1.2
SOD2YHR008C YLR460CP54007 376 aa7.53□□□□□ -1.2
SOD2YHR008C YPR172WQ06608 200 aa7.53□□□□□ -1.2
SOD2YHR008C VAC14Q06708 880 aa7.53□□□□□ -1.2
SOD2YHR008C YDL211CQ12121 372 aa7.53□□□□□ -1.2
SOD2YHR008C RRP36Q12481 300 aaPredicted RBP7.53□□□□□ -1.2
SOD2YHR008C SFG1Q12507 346 aa7.53□□□□□ -1.2
SOD2YHR008C MHT1Q12525 324 aa7.53□□□□□ -1.2
SOD2YHR008C GLT1Q12680 2145 aaKnown RBP7.53□□□□□ -1.2
SOD2YHR008C YMR030W-AQ3E760 96 aa7.53□□□□□ -1.2
SOD2YHR008C YOR019WQ99248 730 aa7.53□□□□□ -1.2
SOD2YHR008C RPS17AP02407 136 aaKnown RBP7.52□□□□□ -1.21
SOD2YHR008C RPL20AP0CX23 172 aaKnown RBP7.52□□□□□ -1.21
SOD2YHR008C RPL20BP0CX24 172 aaPredicted RBP7.52□□□□□ -1.21
SOD2YHR008C RPS17BP14127 136 aaKnown RBP7.52□□□□□ -1.21
SOD2YHR008C RPI1P23250 407 aaKnown RBP7.52□□□□□ -1.21
SOD2YHR008C GPI12P23797 304 aa7.52□□□□□ -1.21
SOD2YHR008C GBP2P25555 427 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
SOD2YHR008C PTR2P32901 601 aa7.52□□□□□ -1.21
SOD2YHR008C TDP1P38319 544 aa7.52□□□□□ -1.21
SOD2YHR008C SHR5P41912 237 aa7.52□□□□□ -1.21
SOD2YHR008C YGL176CP46945 554 aa7.52□□□□□ -1.21
SOD2YHR008C YGR053CP53234 283 aa7.52□□□□□ -1.21
SOD2YHR008C MIX14Q04341 121 aa7.52□□□□□ -1.21
SOD2YHR008C YOR365CQ08844 703 aa7.52□□□□□ -1.21
SOD2YHR008C YTM1Q12024 460 aaPredicted RBP7.52□□□□□ -1.21
SOD2YHR008C TY4B-PA0A0B7P3V8 1104 aa7.51□□□□□ -1.21
SOD2YHR008C SPO16P17122 198 aa7.51□□□□□ -1.21
SOD2YHR008C ARE1P25628 610 aa7.51□□□□□ -1.21
SOD2YHR008C IME2P32581 645 aa7.51□□□□□ -1.21
SOD2YHR008C EMP70P32802 667 aa7.51□□□□□ -1.21
SOD2YHR008C UBC6P33296 250 aaPredicted RBP7.51□□□□□ -1.21
SOD2YHR008C DTR1P38125 572 aa7.51□□□□□ -1.21
SOD2YHR008C HSM3P38348 480 aa7.51□□□□□ -1.21
SOD2YHR008C FKH2P41813 862 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms