RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	HMG1	P12683	1054 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	YPK1	P12688	680 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	RED1	P14291	827 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
XKS1	YGR194C	ATP12	P22135	325 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	CHA1	P25379	360 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	VBA3	P25594	458 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	PMI40	P29952	429 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	IMP3	P32899	183 aa	Predicted RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	TGL1	P34163	548 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	NAT2	P37293	288 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	ROT2	P38138	954 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
XKS1	YGR194C	ARN2	P38724	620 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	YHK8	P38776	514 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	KEL1	P38853	1164 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	IPT1	P38954	527 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	LYS9	P38999	446 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	CCT6	P39079	546 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	SOP4	P39543	234 aa	Predicted RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	YEL020C	P39994	560 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	TPA1	P40032	644 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	SEC28	P40509	296 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	GCD10	P41814	478 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	SER2	P42941	309 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	YGR210C	P42942	411 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	YJR154W	P47181	346 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	LYS4	P49367	693 aa	Predicted RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	RPL4B	P49626	362 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	ARO8	P53090	500 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	GTR2	P53290	341 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	SNF12	P53628	566 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	CPR8	P53728	308 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	ZRG17	P53735	605 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	SPR6	Q01684	191 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	NUP49	Q02199	472 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	RMI1	Q02685	241 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	GRX5	Q02784	150 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	MAK3	Q03503	176 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	YML037C	Q03703	340 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	COS7	Q07788	383 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	PUS9	Q12069	462 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	YDL109C	Q12103	647 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	RBD2	Q12270	262 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	TRM10	Q12400	293 aa		4.24	□□□□□ -1.73
XKS1	YGR194C	EFG1	Q3E705	233 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	COS2	P0CX12	379 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	COS3	P0CX13	379 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	DBR1	P24309	405 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	ATG22	P25568	528 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	BUB2	P26448	306 aa	Predicted RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	PHO91	P27514	894 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	CIN8	P27895	1000 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	ARP2	P32381	391 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	RPD3	P32561	433 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	PAH1	P32567	862 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	BEM3	P32873	1128 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	GPX2	P38143	162 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	MMS4	P38257	691 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	IFA38	P38286	347 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YHR131C	P38835	850 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	AIM18	P38884	321 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	ACA1	P39970	489 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YER034W	P40022	185 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	YER137C	P40083	148 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	MNN11	P46985	422 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	RPS12	P48589	143 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	ALT2	P52892	507 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	PRP38	Q00723	242 aa	Predicted RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	YMR010W	Q03687	405 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	RQC1	Q05468	723 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	SWA2	Q06677	668 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	GUD1	Q07729	489 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	ENB1	Q08299	606 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	SLD7	Q08457	257 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	TRE2	Q08693	809 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	GUP2	Q08929	609 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	UBX3	Q12229	455 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	MDY2	Q12285	212 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YPR1	Q12458	312 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	ARG81	P05085	880 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	ATP1	P07251	545 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	YAP1	P19880	650 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	ARO7	P32178	256 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	CDC5	P32562	705 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	PPQ1	P32945	549 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	SHP1	P34223	423 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YKL100C	P34248	587 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	MRPL17	P36528	281 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	MNN2	P38069	597 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YMC2	P38087	329 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	LEU5	P38702	357 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	LSM12	P38828	187 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	MNN9	P39107	395 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	FHL1	P39521	936 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	MTW1	P39731	289 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YEL025C	P39991	1188 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	PHM8	P40025	321 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	COA1	P40452	197 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	MNN5	P46982	586 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms