RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W ARX1Q03862 593 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W MFB1Q04922 465 aa3.58□□□□□ -1.84
SPT6YGR116W YPR172WQ06608 200 aa3.58□□□□□ -1.84
SPT6YGR116W RPS10AQ08745 105 aaPredicted RBP3.58□□□□□ -1.84
SPT6YGR116W FRE3Q08905 711 aa3.58□□□□□ -1.84
SPT6YGR116W YPL247CQ12523 523 aa3.58□□□□□ -1.84
SPT6YGR116W RAD52P06778 471 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W OCA4P25366 362 aa3.57□□□□□ -1.84
SPT6YGR116W BEM1P29366 551 aa3.57□□□□□ -1.84
SPT6YGR116W APT2P36973 181 aa3.57□□□□□ -1.84
SPT6YGR116W ABZ1P37254 787 aaPredicted RBP3.57□□□□□ -1.84
SPT6YGR116W ECM31P38122 312 aa3.57□□□□□ -1.84
SPT6YGR116W SHE3P38272 425 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W MUP3P38734 546 aa3.57□□□□□ -1.84
SPT6YGR116W YEL028WP39989 153 aa3.57□□□□□ -1.84
SPT6YGR116W RRN9P53437 365 aa3.57□□□□□ -1.84
SPT6YGR116W IDP3P53982 420 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W TIM44Q01852 431 aa3.57□□□□□ -1.84
SPT6YGR116W IRC15Q02733 499 aa3.57□□□□□ -1.84
SPT6YGR116W GRX8Q05926 109 aa3.57□□□□□ -1.84
SPT6YGR116W FRE5Q08908 694 aa3.57□□□□□ -1.84
SPT6YGR116W GPM2Q12008 311 aa3.57□□□□□ -1.84
SPT6YGR116W RPL3P14126 387 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W MET8P15807 274 aa3.57□□□□□ -1.84
SPT6YGR116W NCP1P16603 691 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W PPH22P23595 377 aa3.57□□□□□ -1.84
SPT6YGR116W NAM9P27929 486 aa3.57□□□□□ -1.84
SPT6YGR116W YBL010CP32788 280 aa3.57□□□□□ -1.84
SPT6YGR116W ZRT3P34240 503 aa3.57□□□□□ -1.84
SPT6YGR116W TAT1P38085 619 aa3.57□□□□□ -1.84
SPT6YGR116W MDM31P38880 579 aa3.57□□□□□ -1.84
SPT6YGR116W NVJ1P38881 321 aa3.57□□□□□ -1.84
SPT6YGR116W SEN34P39707 275 aa3.57□□□□□ -1.84
SPT6YGR116W SSO2P39926 295 aa3.57□□□□□ -1.84
SPT6YGR116W ATM1P40416 690 aa3.57□□□□□ -1.84
SPT6YGR116W CHA4P43634 648 aa3.57□□□□□ -1.84
SPT6YGR116W PRM8P53174 237 aa3.57□□□□□ -1.84
SPT6YGR116W POP6P53218 158 aa3.57□□□□□ -1.84
SPT6YGR116W CDC14Q00684 551 aa3.57□□□□□ -1.84
SPT6YGR116W GRX5Q02784 150 aa3.57□□□□□ -1.84
SPT6YGR116W BNA7Q04066 261 aa3.57□□□□□ -1.84
SPT6YGR116W EMI2Q04409 500 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W UBX5Q06682 500 aa3.57□□□□□ -1.84
SPT6YGR116W FLP1P03870 423 aa3.57□□□□□ -1.84
SPT6YGR116W AI4P03878 556 aa3.57□□□□□ -1.84
SPT6YGR116W PRP28P23394 588 aa3.57□□□□□ -1.84
SPT6YGR116W UTR4P32626 227 aa3.57□□□□□ -1.84
SPT6YGR116W VRP1P37370 817 aa3.57□□□□□ -1.84
SPT6YGR116W TSL1P38427 1098 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W YHR045WP38775 560 aa3.57□□□□□ -1.84
SPT6YGR116W GID8P40208 455 aa3.57□□□□□ -1.84
SPT6YGR116W FET4P40988 552 aa3.57□□□□□ -1.84
SPT6YGR116W GAB1P41733 394 aa3.57□□□□□ -1.84
SPT6YGR116W MAF1P41910 395 aa3.57□□□□□ -1.84
SPT6YGR116W PMT4P46971 762 aa3.57□□□□□ -1.84
SPT6YGR116W RRT6P53117 311 aaPredicted RBP3.57□□□□□ -1.84
SPT6YGR116W YNL181WP53878 407 aa3.57□□□□□ -1.84
SPT6YGR116W SPP2Q02521 185 aa3.57□□□□□ -1.84
SPT6YGR116W FDC1Q03034 503 aa3.57□□□□□ -1.84
SPT6YGR116W GAS3Q03655 524 aa3.57□□□□□ -1.84
SPT6YGR116W DUS3Q06053 668 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W YLR346CQ06139 101 aa3.57□□□□□ -1.84
SPT6YGR116W NUS1Q12063 375 aa3.57□□□□□ -1.84
SPT6YGR116W JLP1Q12358 412 aa3.57□□□□□ -1.84
SPT6YGR116W RRP12Q12754 1228 aaKnown RBP3.57□□□□□ -1.84
SPT6YGR116W ADE4P04046 510 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W GAL3P13045 520 aa3.56□□□□□ -1.84
SPT6YGR116W GAL2P13181 574 aa3.56□□□□□ -1.84
SPT6YGR116W GLN4P13188 809 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W BUD5P25300 642 aaPredicted RBP3.56□□□□□ -1.84
SPT6YGR116W RHB1P25378 209 aa3.56□□□□□ -1.84
SPT6YGR116W PET127P32606 800 aa3.56□□□□□ -1.84
SPT6YGR116W YPT7P32939 208 aa3.56□□□□□ -1.84
SPT6YGR116W YPT52P36018 234 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W CDS1P38221 457 aa3.56□□□□□ -1.84
SPT6YGR116W RRF1P38771 230 aa3.56□□□□□ -1.84
SPT6YGR116W NMD3P38861 518 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W YER184CP39961 794 aa3.56□□□□□ -1.84
SPT6YGR116W MOG1P47123 218 aa3.56□□□□□ -1.84
SPT6YGR116W ACF4P47129 309 aa3.56□□□□□ -1.84
SPT6YGR116W HMS2P47175 358 aa3.56□□□□□ -1.84
SPT6YGR116W HOS2P53096 452 aaPredicted RBP3.56□□□□□ -1.84
SPT6YGR116W SHY1P53266 389 aa3.56□□□□□ -1.84
SPT6YGR116W RPN5Q12250 445 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W PMD1P32634 1753 aa3.56□□□□□ -1.84
SPT6YGR116W HIS1P00498 297 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W RPS9BP05755 195 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W RPS1BP23248 255 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W MNE1P24720 663 aa3.56□□□□□ -1.84
SPT6YGR116W CNB1P25296 175 aa3.56□□□□□ -1.84
SPT6YGR116W PGS1P25578 521 aa3.56□□□□□ -1.84
SPT6YGR116W SRB6P32570 121 aa3.56□□□□□ -1.84
SPT6YGR116W BAP2P38084 609 aa3.56□□□□□ -1.84
SPT6YGR116W YHL041WP38730 149 aa3.56□□□□□ -1.84
SPT6YGR116W RMD6P39975 231 aa3.56□□□□□ -1.84
SPT6YGR116W YAE1P47118 141 aaPredicted RBP3.56□□□□□ -1.84
SPT6YGR116W YJR107WP47145 328 aa3.56□□□□□ -1.84
SPT6YGR116W STR3P53101 465 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W SLI1P53304 468 aa3.56□□□□□ -1.84
SPT6YGR116W SDH1Q00711 640 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms