RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W CLD1P53264 445 aa6.15□□□□□ -1.42
MSP1YGR028W YGR266WP53326 701 aa6.15□□□□□ -1.42
MSP1YGR028W KTR5P53966 522 aaPredicted RBP6.15□□□□□ -1.42
MSP1YGR028W RNY1Q02933 434 aaKnown RBP6.15□□□□□ -1.42
MSP1YGR028W MTQ2Q03920 221 aaPredicted RBP6.15□□□□□ -1.42
MSP1YGR028W CSN9Q03981 162 aa6.15□□□□□ -1.42
MSP1YGR028W TRX2P22803 104 aaKnown RBP6.14□□□□□ -1.43
MSP1YGR028W AAD3P25612 363 aa6.14□□□□□ -1.43
MSP1YGR028W BUB3P26449 341 aa6.14□□□□□ -1.43
MSP1YGR028W MVD1P32377 396 aaKnown RBP6.14□□□□□ -1.43
MSP1YGR028W PPG1P32838 368 aa6.14□□□□□ -1.43
MSP1YGR028W BEM3P32873 1128 aa6.14□□□□□ -1.43
MSP1YGR028W ETR1P38071 380 aa6.14□□□□□ -1.43
MSP1YGR028W MUP3P38734 546 aa6.14□□□□□ -1.43
MSP1YGR028W DSS1P39112 969 aa6.14□□□□□ -1.43
MSP1YGR028W FAU1P40099 211 aa6.14□□□□□ -1.43
MSP1YGR028W AZF1P41696 914 aa6.14□□□□□ -1.43
MSP1YGR028W YGR015CP53208 328 aa6.14□□□□□ -1.43
MSP1YGR028W RNH70P53331 553 aa6.14□□□□□ -1.43
MSP1YGR028W SNP1Q00916 300 aaPredicted RBP6.14□□□□□ -1.43
MSP1YGR028W MUS81Q04149 632 aaPredicted RBP6.14□□□□□ -1.43
MSP1YGR028W CHS5Q12114 671 aaKnown RBP6.14□□□□□ -1.43
MSP1YGR028W RGT2Q12300 763 aa6.14□□□□□ -1.43
MSP1YGR028W PNS1Q12412 539 aa6.14□□□□□ -1.43
MSP1YGR028W LAG2Q92325 660 aa6.14□□□□□ -1.43
MSP1YGR028W NOP14Q99207 810 aaKnown RBP6.14□□□□□ -1.43
MSP1YGR028W CDC8P00572 216 aa6.13□□□□□ -1.43
MSP1YGR028W GAL7P08431 366 aa6.13□□□□□ -1.43
MSP1YGR028W SKT5P34226 696 aa6.13□□□□□ -1.43
MSP1YGR028W NUP120P35729 1037 aa6.13□□□□□ -1.43
MSP1YGR028W ASK1P35734 292 aa6.13□□□□□ -1.43
MSP1YGR028W BEM4P39011 633 aa6.13□□□□□ -1.43
MSP1YGR028W NPT1P39683 429 aaKnown RBP6.13□□□□□ -1.43
MSP1YGR028W YRB1P41920 201 aaKnown RBP6.13□□□□□ -1.43
MSP1YGR028W STB2P46679 850 aa6.13□□□□□ -1.43
MSP1YGR028W MPS2P53159 387 aa6.13□□□□□ -1.43
MSP1YGR028W RTS3P53289 263 aa6.13□□□□□ -1.43
MSP1YGR028W MAL13P53338 473 aa6.13□□□□□ -1.43
MSP1YGR028W YMR209CQ03648 457 aa6.13□□□□□ -1.43
MSP1YGR028W HPT1Q04178 221 aaKnown RBP6.13□□□□□ -1.43
MSP1YGR028W YOL107WQ12239 342 aa6.13□□□□□ -1.43
MSP1YGR028W SRN2Q99176 213 aa6.13□□□□□ -1.43
MSP1YGR028W PNO1Q99216 274 aaKnown RBP6.13□□□□□ -1.43
MSP1YGR028W YLR415CO13578 112 aa6.12□□□□□ -1.43
MSP1YGR028W CDC9P04819 755 aa6.12□□□□□ -1.43
MSP1YGR028W MET3P08536 511 aa6.12□□□□□ -1.43
MSP1YGR028W SSC1P0CS90 654 aaKnown RBP6.12□□□□□ -1.43
MSP1YGR028W RPB4P20433 221 aaPredicted RBP6.12□□□□□ -1.43
MSP1YGR028W ARG1P22768 420 aa6.12□□□□□ -1.43
MSP1YGR028W ERG4P25340 473 aa6.12□□□□□ -1.43
MSP1YGR028W SIN4P32259 974 aa6.12□□□□□ -1.43
MSP1YGR028W RIM1P32445 135 aaKnown RBP6.12□□□□□ -1.43
MSP1YGR028W FTH1P38310 465 aa6.12□□□□□ -1.43
MSP1YGR028W RPP1P38786 293 aa6.12□□□□□ -1.43
MSP1YGR028W YHR210CP38893 341 aa6.12□□□□□ -1.43
MSP1YGR028W MET30P39014 640 aa6.12□□□□□ -1.43
MSP1YGR028W DHH1P39517 506 aaKnown RBP6.12□□□□□ -1.43
MSP1YGR028W YJL206CP39529 758 aa6.12□□□□□ -1.43
MSP1YGR028W ELP2P42935 788 aa6.12□□□□□ -1.43
MSP1YGR028W YJR149WP47177 404 aa6.12□□□□□ -1.43
MSP1YGR028W BUL1P48524 976 aa6.12□□□□□ -1.43
MSP1YGR028W BIO4P53630 237 aa6.12□□□□□ -1.43
MSP1YGR028W RRN11Q04712 507 aa6.12□□□□□ -1.43
MSP1YGR028W BCH1Q05029 724 aa6.12□□□□□ -1.43
MSP1YGR028W YLR177WQ06251 628 aa6.12□□□□□ -1.43
MSP1YGR028W VAM6Q07468 1049 aa6.12□□□□□ -1.43
MSP1YGR028W ATG29Q12092 213 aa6.12□□□□□ -1.43
MSP1YGR028W MDY2Q12285 212 aa6.12□□□□□ -1.43
MSP1YGR028W RGS2Q99188 309 aa6.12□□□□□ -1.43
MSP1YGR028W GCN1P33892 2672 aaKnown RBP6.12□□□□□ -1.43
MSP1YGR028W LAT1P12695 482 aaKnown RBP6.11□□□□□ -1.43
MSP1YGR028W SPP381P38282 291 aaPredicted RBP6.11□□□□□ -1.43
MSP1YGR028W MTG2P38860 518 aa6.11□□□□□ -1.43
MSP1YGR028W MNL1P38888 796 aa6.11□□□□□ -1.43
MSP1YGR028W CCT2P39076 527 aaKnown RBP6.11□□□□□ -1.43
MSP1YGR028W SSP120P39931 234 aaKnown RBP6.11□□□□□ -1.43
MSP1YGR028W NDE1P40215 560 aa6.11□□□□□ -1.43
MSP1YGR028W MEP1P40260 492 aa6.11□□□□□ -1.43
MSP1YGR028W YJR030CP47101 745 aa6.11□□□□□ -1.43
MSP1YGR028W IBA57P47158 497 aa6.11□□□□□ -1.43
MSP1YGR028W MTR3P48240 250 aaPredicted RBP6.11□□□□□ -1.43
MSP1YGR028W ALG12P53730 551 aa6.11□□□□□ -1.43
MSP1YGR028W SLT2Q00772 484 aa6.11□□□□□ -1.43
MSP1YGR028W SHR3Q02774 210 aa6.11□□□□□ -1.43
MSP1YGR028W RSM10Q03201 203 aa6.11□□□□□ -1.43
MSP1YGR028W VPS60Q03390 229 aa6.11□□□□□ -1.43
MSP1YGR028W DLT1Q04216 342 aa6.11□□□□□ -1.43
MSP1YGR028W YMR034CQ05131 434 aaPredicted RBP6.11□□□□□ -1.43
MSP1YGR028W RIF2Q06208 395 aa6.11□□□□□ -1.43
MSP1YGR028W NOP6Q07623 225 aaKnown RBP6.11□□□□□ -1.43
MSP1YGR028W NUR1Q12066 484 aa6.11□□□□□ -1.43
MSP1YGR028W YPR011CQ12251 326 aa6.11□□□□□ -1.43
MSP1YGR028W ADH4P10127 382 aa6.1□□□□□ -1.43
MSP1YGR028W RSR1P13856 272 aa6.1□□□□□ -1.43
MSP1YGR028W GCY1P14065 312 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
MSP1YGR028W RRN10P38204 145 aa6.1□□□□□ -1.43
MSP1YGR028W VRG4P40107 337 aa6.1□□□□□ -1.43
MSP1YGR028W PEP8P40335 379 aa6.1□□□□□ -1.43
MSP1YGR028W YIL086CP40503 102 aa6.1□□□□□ -1.43
MSP1YGR028W MIC19P43594 170 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms