RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W YNL134CP53912 376 aaKnown RBP3.25□□□□□ -1.89
LIF1YGL090W BET4Q00618 327 aa3.25□□□□□ -1.89
LIF1YGL090W YDR541CQ03049 344 aa3.25□□□□□ -1.89
LIF1YGL090W RLI1Q03195 608 aaKnown RBP3.25□□□□□ -1.89
LIF1YGL090W RCR2Q03446 210 aaKnown RBP3.25□□□□□ -1.89
LIF1YGL090W YDR179W-AQ03983 463 aa3.25□□□□□ -1.89
LIF1YGL090W GIM5Q04493 163 aa3.25□□□□□ -1.89
LIF1YGL090W UFO1Q04511 668 aa3.25□□□□□ -1.89
LIF1YGL090W FUS2Q05670 677 aa3.25□□□□□ -1.89
LIF1YGL090W NNT1Q05874 261 aa3.25□□□□□ -1.89
LIF1YGL090W YFT2Q06676 274 aa3.25□□□□□ -1.89
LIF1YGL090W COS7Q07788 383 aa3.25□□□□□ -1.89
LIF1YGL090W YLL007CQ07799 665 aa3.25□□□□□ -1.89
LIF1YGL090W RDR1Q08904 546 aa3.25□□□□□ -1.89
LIF1YGL090W ICL2Q12031 575 aa3.25□□□□□ -1.89
LIF1YGL090W AIM41Q12032 185 aa3.25□□□□□ -1.89
LIF1YGL090W SRO7Q12038 1033 aa3.25□□□□□ -1.89
LIF1YGL090W DCP1Q12517 231 aaPredicted RBP3.25□□□□□ -1.89
LIF1YGL090W PNO1Q99216 274 aaKnown RBP3.25□□□□□ -1.89
LIF1YGL090W IRC20Q06554 1556 aa3.25□□□□□ -1.89
LIF1YGL090W YLL067CQ07888 1374 aa3.25□□□□□ -1.89
LIF1YGL090W UFD4P33202 1483 aa3.24□□□□□ -1.89
LIF1YGL090W MF(ALPHA)1P01149 165 aa3.24□□□□□ -1.89
LIF1YGL090W ILV2P07342 687 aaKnown RBP3.24□□□□□ -1.89
LIF1YGL090W ARD1P07347 238 aaPredicted RBP3.24□□□□□ -1.89
LIF1YGL090W URA4P20051 364 aa3.24□□□□□ -1.89
LIF1YGL090W DAL81P21657 970 aa3.24□□□□□ -1.89
LIF1YGL090W VMA16P23968 213 aa3.24□□□□□ -1.89
LIF1YGL090W HXT1P32465 570 aa3.24□□□□□ -1.89
LIF1YGL090W TUL1P36096 758 aa3.24□□□□□ -1.89
LIF1YGL090W AIM29P36154 155 aa3.24□□□□□ -1.89
LIF1YGL090W ADE17P38009 592 aaKnown RBP3.24□□□□□ -1.89
LIF1YGL090W MAL32P38158 584 aa3.24□□□□□ -1.89
LIF1YGL090W PFF1P38244 976 aa3.24□□□□□ -1.89
LIF1YGL090W YHR045WP38775 560 aa3.24□□□□□ -1.89
LIF1YGL090W SMF2P38778 549 aa3.24□□□□□ -1.89
LIF1YGL090W END3P39013 349 aa3.24□□□□□ -1.89
LIF1YGL090W SER3P40054 469 aa3.24□□□□□ -1.89
LIF1YGL090W ATM1P40416 690 aa3.24□□□□□ -1.89
LIF1YGL090W SGN1P40561 250 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
LIF1YGL090W CDC40P40968 455 aaPredicted RBP3.24□□□□□ -1.89
LIF1YGL090W CIN1P40987 1014 aa3.24□□□□□ -1.89
LIF1YGL090W BIT61P47041 543 aa3.24□□□□□ -1.89
LIF1YGL090W RMR1P53060 241 aa3.24□□□□□ -1.89
LIF1YGL090W YGL114WP53134 725 aa3.24□□□□□ -1.89
LIF1YGL090W LIF1P53150 421 aa3.24□□□□□ -1.89
LIF1YGL090W MPS2P53159 387 aa3.24□□□□□ -1.89
LIF1YGL090W YGR067CP53243 804 aa3.24□□□□□ -1.89
LIF1YGL090W VOA1P53262 265 aa3.24□□□□□ -1.89
LIF1YGL090W YGR126WP53274 230 aa3.24□□□□□ -1.89
LIF1YGL090W CAF130P53280 1122 aaPredicted RBP3.24□□□□□ -1.89
LIF1YGL090W ZPR1P53303 486 aaKnown RBP3.24□□□□□ -1.89
LIF1YGL090W MAL12P53341 584 aa3.24□□□□□ -1.89
LIF1YGL090W YNL260CP53846 198 aa3.24□□□□□ -1.89
LIF1YGL090W TRS23Q03784 219 aa3.24□□□□□ -1.89
LIF1YGL090W YMR130WQ04223 302 aa3.24□□□□□ -1.89
LIF1YGL090W PDS5Q04264 1277 aa3.24□□□□□ -1.89
LIF1YGL090W SMA2Q04658 369 aa3.24□□□□□ -1.89
LIF1YGL090W ARG7Q04728 441 aa3.24□□□□□ -1.89
LIF1YGL090W STE23Q06010 1027 aa3.24□□□□□ -1.89
LIF1YGL090W YPR078CQ06813 372 aa3.24□□□□□ -1.89
LIF1YGL090W RTT109Q07794 436 aa3.24□□□□□ -1.89
LIF1YGL090W YOL107WQ12239 342 aa3.24□□□□□ -1.89
LIF1YGL090W MTR10Q99189 972 aa3.24□□□□□ -1.89
LIF1YGL090W ARG81P05085 880 aa3.23□□□□□ -1.89
LIF1YGL090W SCH9P11792 824 aaKnown RBP3.23□□□□□ -1.89
LIF1YGL090W PRP16P15938 1071 aaPredicted RBP3.23□□□□□ -1.89
LIF1YGL090W PDA1P16387 420 aaKnown RBP3.23□□□□□ -1.89
LIF1YGL090W SEC15P22224 910 aa3.23□□□□□ -1.89
LIF1YGL090W MEK1P24719 497 aaPredicted RBP3.23□□□□□ -1.89
LIF1YGL090W KIN82P25341 720 aa3.23□□□□□ -1.89
LIF1YGL090W ADH7P25377 361 aa3.23□□□□□ -1.89
LIF1YGL090W RAD14P28519 371 aa3.23□□□□□ -1.89
LIF1YGL090W YME1P32795 747 aa3.23□□□□□ -1.89
LIF1YGL090W MRPL10P36520 322 aa3.23□□□□□ -1.89
LIF1YGL090W YBR139WP38109 508 aa3.23□□□□□ -1.89
LIF1YGL090W POP7P38291 140 aa3.23□□□□□ -1.89
LIF1YGL090W SWC5P38326 303 aa3.23□□□□□ -1.89
LIF1YGL090W RTT107P38850 1070 aa3.23□□□□□ -1.89
LIF1YGL090W FAD1P38913 306 aa3.23□□□□□ -1.89
LIF1YGL090W VHS2P40463 436 aa3.23□□□□□ -1.89
LIF1YGL090W SEC24P40482 926 aaKnown RBP3.23□□□□□ -1.89
LIF1YGL090W BNA6P43619 295 aa3.23□□□□□ -1.89
LIF1YGL090W FAR3P46671 204 aa3.23□□□□□ -1.89
LIF1YGL090W YHC3P47040 408 aa3.23□□□□□ -1.89
LIF1YGL090W TMA22P47089 198 aaPredicted RBP3.23□□□□□ -1.89
LIF1YGL090W ASN2P49090 572 aaKnown RBP3.23□□□□□ -1.89
LIF1YGL090W DRN1P53255 507 aaKnown RBP3.23□□□□□ -1.89
LIF1YGL090W SLT2Q00772 484 aa3.23□□□□□ -1.89
LIF1YGL090W URH1Q04179 340 aa3.23□□□□□ -1.89
LIF1YGL090W YMR226CQ05016 267 aaKnown RBP3.23□□□□□ -1.89
LIF1YGL090W ARR2Q06597 130 aa3.23□□□□□ -1.89
LIF1YGL090W ECM30Q06673 1274 aa3.23□□□□□ -1.89
LIF1YGL090W SHS1Q07657 551 aa3.23□□□□□ -1.89
LIF1YGL090W SMC5Q08204 1093 aa3.23□□□□□ -1.89
LIF1YGL090W YOR389WQ08912 624 aa3.23□□□□□ -1.89
LIF1YGL090W VIK1Q12045 647 aa3.23□□□□□ -1.89
LIF1YGL090W TGS1Q12052 315 aa3.23□□□□□ -1.89
LIF1YGL090W YDL007C-AQ2V2Q0 85 aa3.23□□□□□ -1.89
LIF1YGL090W YBR255C-AQ3E776 120 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms